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A simple statistical model is developed for the dynamics of the mean global annual temperature. The model combines the logarithmic effect of carbon dioxide concentration increase and the input by climatic cycles. Model parameters are determined from data of instrumental observations for 1850–2010. The model confirms the presence of climatic cycles with the period of 10.5 and 68.8 years in the global temperature dynamics. The trajectories of the global temperature changes for the XXI century are obtained under the scenarios of carbon dioxide concentration changes from the 5^th IPCC Assessment Report. The comparison revealed that the global temperature trajectories from the Report are 0.9–1.8 °C above those obtained in the model.

The paper outlines the approaches to mathematical modeling correlation adaptometry techniques widely used in biology and medicine. The analysis is based on models employed in descriptions of structured biological systems. It is assumed that the distribution density of the biological population numbers satisfies the equation of Kolmogorov-Fokker-Planck. Using this technique evaluated the effectiveness of treatment of patients with obesity. All patients depending on the obesity degree and the comorbidity nature were divided into three groups. Shows a decrease in weight of the correlation graph computed from the measured in the patients of the indicators that characterizes the effectiveness of the treatment for all studied groups. This technique was also used to assess the intensity of the training loads in academic rowing three age groups. It was shown that with the highest voltage worked with athletes for youth group. Also, using the technique of correlation adaptometry evaluated the effectiveness of the treatment of hormone replacement therapy in women. All the patients depending on the assigned drug were divided into four groups. In the standard analysis of the dynamics of mean values of indicators, it was shown that in the course of the treatment were observed normalization of the averages for all groups of patients. However, using the technique of correlation adaptometry it was found that during the first six months the weight of the correlation graph was decreasing and during the second six months the weight increased for all study groups. This indicates the excessive length of the annual course of hormone replacement therapy and the practicality of transition to a semiannual rate.

The study of the mechanism for the development of mass panic in view of its extreme importance and social danger is an important scientific task. Available information about the mechanism of her development is based mainly on the work of psychologists and belongs to the category of inaccurate. Therefore, the theory of fuzzy sets has been chosen as a tool for developing a mathematical model of a person's susceptibility to panic situations. As a result of the study, an fuzzy model was developed, consisting of blocks: “Fuzzyfication”, where the degree of belonging of the values of the input parameters to fuzzy sets is calculated; “Inference” where, based on the degree of belonging of the input parameters, the resulting function of belonging of the output value to an odd model is calculated; “Defuzzyfication”, where using the center of gravity method, the only quantitative value of the output variable characterizing a person's susceptibility to panic situations is determined Since the real quantitative values for linguistic variables mental properties of a person are unknown, then to assess the quality of the developed model, without endangering people, it is not possible. Therefore, the quality of the results of fuzzy modeling was estimated by the calculated value of the determination coefficient R2, which showed that the developed fuzzy model belongs to the category of good quality models $(R^2 = 0.93)$, which confirms the legitimacy of the assumptions made during her development. In accordance with to the results of the simulation, human susceptibility to panic situations for sanguinics and cholerics can be attributed to “increased” (0.88), and for phlegmatics and melancholics — to “moderate” (0.38). This means that cholerics and sanguinics can become epicenters of panic and the initiators of stampede, and phlegmatics and melancholics — obstacles to evacuation routes. What should be taken into account when developing effective evacuation measures, the main task of which is to quickly and safely evacuate people from adverse conditions. In the approved methods, the calculation of normative values of safety parameters is based on simplified analytical models of human flow movement, because a large number of factors have to be taken into account, some of which are quantitatively uncertain. The obtained result in the form of quantitative estimates of a person's susceptibility to panic situations will increase the accuracy of calculations.

A mass congestion of people always represents a potential danger and threat for their lives. In addition, every year in the world a very large number of people die because of the crush, the main cause of which is mass panic. Therefore, the study of the phenomenon of mass panic in view of her extreme social danger is an important scientific task. Available information, about the processes of her occurrence and spread refers to the category inaccurate. Therefore, the theory of fuzzy sets has been chosen as a tool for developing a mathematical model of the mechanism of transmitting panic state among people with various temperament species.

When developing an fuzzy model, it was assumed that panic, from the epicenter of the shocking stimulus, spreads among people according to the wave principle, passing at different frequencies through different environments (types of human temperament), and is determined by the speed and intensity of the circular reaction of the mechanism of transmitting panic state among people. Therefore, the developed fuzzy model, along with two inputs, has two outputs — the speed and intensity of the circular reaction. In the block «Fuzzyfication», the degrees of membership of the numerical values of the input parameters to fuzzy sets are calculated. The «Inference» block at the input receives degrees of belonging for each input parameter and at the output determines the resulting function of belonging the speed of the circular reaction and her derivative, which is a function of belonging for the intensity of the circular reaction. In the «Defuzzyfication» block, using the center of gravity method, a quantitative value is determined for each output parameter. The quality assessment of the developed fuzzy model, carried out by calculating of the determination coefficient, showed that the developed mathematical model belongs to the category of good quality models.

The result obtained in the form of quantitative assessments of the circular reaction makes it possible to improve the quality of understanding of the mental processes occurring during the transmission of the panic state among people. In addition, this makes it possible to improve existing and develop new models of chaotic humans behaviors. Which are designed to develop effective solutions in crisis situations, aimed at full or partial prevention of the spread of mass panic, leading to the emergence of panic flight and the appearance of human casualties.

The paper considers a method for studying panel data based on the use of agglomerative hierarchical clustering — grouping objects based on the similarities and differences in their features into a hierarchy of clusters nested into each other. We used 2 alternative methods for calculating Euclidean distances between objects — the distance between the values averaged over observation interval, and the distance using data for all considered years. Three alternative methods for calculating the distances between clusters were compared. In the first case, the distance between the nearest elements from two clusters is considered to be distance between these clusters, in the second — the average over pairs of elements, in the third — the distance between the most distant elements. The efficiency of using two clustering quality indices, the Dunn and Silhouette index, was studied to select the optimal number of clusters and evaluate the statistical significance of the obtained solutions. The method of assessing statistical reliability of cluster structure consisted in comparing the quality of clustering on a real sample with the quality of clustering on artificially generated samples of panel data with the same number of objects, features and lengths of time series. Generation was made from a fixed probability distribution. At the same time, simulation methods imitating Gaussian white noise and random walk were used. Calculations with the Silhouette index showed that a random walk is characterized not only by spurious regression, but also by “spurious clustering”. Clustering was considered reliable for a given number of selected clusters if the index value on the real sample turned out to be greater than the value of the 95% quantile for artificial data. A set of time series of indicators characterizing production in the regions of the Russian Federation was used as a sample of real data. For these data only Silhouette shows reliable clustering at the level p < 0.05. Calculations also showed that index values for real data are generally closer to values for random walks than for white noise, but it have significant differences from both. Since three-dimensional feature space is used, the quality of clustering was also evaluated visually. Visually, one can distinguish clusters of points located close to each other, also distinguished as clusters by the applied hierarchical clustering algorithm.

Muscle contraction is controlled by Ca2+ ions via regulatory proteins, troponin and tropomyosin, associated with thin actin filaments in sarcomeres. Depending on the Ca2+ concentration, the thin filament rearranges so that tropomyosin moves along its surface, opening or closing access to actin for the motor domains of myosin molecules, and causing contraction or relaxation, respectively. Numerous point amino acid substitutions in tropomyosin are known, leading to genetic pathologies — myo- and cardiomyopathies caused by changes in the structural and functional properties of the thin filament. The results of molecular dynamics modeling of a fragment of a thin filament of cardiac muscle sarcomeres formed by fibrillar actin and wildtype tropomyosin or with amino acid substitutions: the double stabilizing substitution D137L/G126R and the cardiomyopathic substitution S215L are presented. For numerical calculations, we used a new model of a thin filament fragment containing 26 actin monomers and 4 tropomyosin dimers, with a refined structure of the region of overlap of neighboring tropomyosin molecules in each of the two tropomyosin strands. The simulation results showed that tropomyosin significantly increases the bending stiffness of the thin filament, as previously found experimentally. The double stabilizing replacement D137L/G126R leads to a further increase in this rigidity, and the replacement S215L, on the contrary, leads to its decrease, which also corresponds to experimental data. At the same time, these substitutions have different effects on the angular mobility of the actin helix and only slightly modulate the angular mobility of tropomyosin cables relative to the actin helix and the population of hydrogen bonds between negatively charged tropomyosin residues and positively charged actin residues. The results of the verification of the new model demonstrate that its quality is sufficient for the numerical study of the effect of single amino acid substitutions on the structure and dynamics of thin filaments and study the effects leading to dysregulation of muscle contraction. This model can be used as a useful tool for elucidating the molecular mechanisms of some genetic diseases and assessing the pathogenicity of newly discovered genetic variants.

The problem is to automate the correction of LaTeX documents. Each document is represented as a parse tree. The modified Zhang-Shasha algorithm is used to construct a mapping of tree vertices of the original document to the tree vertices of the edited document, which corresponds to the minimum editing distance. Vertex to vertex maps form the training set, which is used to generate rules for automatic correction. The statistics of the applicability to the edited documents is collected for each rule. It is used for quality assessment and improvement of the rules.

In the development of the previously obtained result on modeling the dynamics of vegetation cover, due to variations in the temperature background, a new scheme for the interval analysis of the dynamics of floristic images of formations is presented in the case when the parameter of the response rate of the model of the dynamics of each counting plant species is set by the interval of scatter of its possible values. The detailed description of the functional parameters of macromodels of biodiversity, desired in fundamental research, taking into account the essential reasons for the observed evolutionary processes, may turn out to be a problematic task. The use of more reliable interval estimates of the variability of functional parameters “bypasses” the problem of uncertainty in the primary assessment of the evolution of the phyto-resource potential of the developed controlled territories. The solutions obtained preserve not only a qualitative picture of the dynamics of species diversity, but also give a rigorous, within the framework of the initial assumptions, a quantitative assessment of the degree of presence of each plant species. The practical significance of two-sided estimation schemes based on the construction of equations for the upper and lower boundaries of the trajectories of the scatter of solutions depends on the conditions and measure of proportional correspondence of the intervals of scatter of the initial parameters with the intervals of scatter of solutions. For dynamic systems, the desired proportionality is not always ensured. The given examples demonstrate the acceptable accuracy of interval estimation of evolutionary processes. It is important to note that the constructions of the estimating equations generate vanishing intervals of scatter of solutions for quasi-constant temperature perturbations of the system. In other words, the trajectories of stationary temperature states of the vegetation cover are not roughened by the proposed interval estimation scheme. The rigor of the result of interval estimation of the species composition of the vegetation cover of formations can become a determining factor when choosing a method in the problems of analyzing the dynamics of species diversity and the plant potential of territorial systems of resource-ecological monitoring. The possibilities of the proposed approach are illustrated by geoinformation images of the computational analysis of the dynamics of the vegetation cover of the Yamal Peninsula and by the graphs of the retro-perspective analysis of the floristic variability of the formations of the landscapelithological group “Upper” based on the data of the summer temperature background of the Salehard weather station from 2010 to 1935. The developed indicators of floristic variability and the given graphs characterize the dynamics of species diversity, both on average and individually in the form of intervals of possible states for each species of plant.

Most biomechanical tasks of interest to clinicians can be solved only using personalized mathematical models. Such models allow to formalize and relate key pathophysiological processes, basing on clinically available data evaluate non-measurable parameters that are important for the diagnosis of diseases, predict the result of a therapeutic or surgical intervention. The use of models in clinical practice imposes additional restrictions: clinicians require model validation on clinical cases, the speed and automation of the entire calculated technological chain, from processing input data to obtaining a result. Limitations on the simulation time, determined by the time of making a medical decision (of the order of several minutes), imply the use of reduction methods that correctly describe the processes under study within the framework of reduced models or machine learning tools.

Personalization of models requires patient-oriented parameters, personalized geometry of a computational domain and generation of a computational mesh. Model parameters are estimated by direct measurements, or methods of solving inverse problems, or methods of machine learning. The requirement of personalization imposes severe restrictions on the number of fitted parameters that can be measured under standard clinical conditions. In addition to parameters, the model operates with boundary conditions that must take into account the patient’s characteristics. Methods for setting personalized boundary conditions significantly depend on the clinical setting of the problem and clinical data. Building a personalized computational domain through segmentation of medical images and generation of the computational grid, as a rule, takes a lot of time and effort due to manual or semi-automatic operations. Development of automated methods for setting personalized boundary conditions and segmentation of medical images with the subsequent construction of a computational grid is the key to the widespread use of mathematical modeling in clinical practice.

The aim of this work is to review our solutions for personalization of mathematical models within the framework of three tasks of clinical cardiology: virtual assessment of hemodynamic significance of coronary artery stenosis, calculation of global blood flow after hemodynamic correction of complex heart defects, calculating characteristics of coaptation of reconstructed aortic valve.

The data of episodic field measurements of carbon dioxide balance components (soil respiration — R_soil, ecosystem respiration — R_eco, net ecosystem exchange — NEE) of hayfields under use and abandoned one are interpreted by modelling. The field measurements were carried within five field campaigns in 2018 and 2019 on the drained part of the Dubna Peatland in Taldom District, Moscow Oblast, Russia. The territory is within humid continental climate zone. Peatland drainage was done out for milled peat extraction. After extraction was stopped, the residual peat deposit (1–1.5 m) was ploughed and grassed (Poa pratensis L.) for hay production. The current ground water level (GWL) varies from 0.3–0.5 m below the surface during wet and up to 1.0 m during dry periods. Daily dynamics of CO2 fluxes was measured using dynamic chamber method in 2018 (August) and 2019 (May, June, August) for abandoned ditch spacing only with sanitary mowing once in 5 years and the ditch spacing with annual mowing. NEE and Reco were measured on the sites with original vegetation, and Rsoil — after vegetation removal. To model a seasonal dynamics of NEE, the dependence of its components (Reco, Rsoil, and Gross ecosystematmosphere exchange of carbon dioxide — GEE) from soil and air temperature, GWL, photosynthetically active radiation, underground and aboveground plant biomass were used. The parametrization of the models has been carried out considering the stability of coefficients estimated by the bootstrap method. R2 (α = 0.05) between simulated and measured Reco was 0.44 (p < 0.0003) on abandoned and 0.59 (p < 0.04) on under use hayfield, and GEE was 0.57 (p < 0.0002) and 0.77 (p < 0.00001), respectively. Numerical experiments were carried out to assess the influence of different haymaking regime on NEE. It was found that NEE for the season (May 15 – September 30) did not differ much between the hayfield without mowing (4.5±1.0 tC·ha–1·season–1) and the abandoned one (6.2±1.4). Single mowing during the season leads to increase of NEE up to 6.5±0.9, and double mowing — up to 7.5±1.4 tC·ha–1·season–1. This means increase of carbon losses and CO2 emission into the atmosphere. Carbon loss on hayfield for both single and double mowing scenario was comparable with abandoned hayfield. The value of removed phytomass for single and double mowing was 0.8±0.1 tC·ha^–1·season^–1 and 1.4±0.1 (45% carbon content in dry phytomass) or 3.0 and 4.4 t·ha^–1·season^–1 of hay (17% moisture content). In comparison with the fallow, the removal of biomass of 0.8±0.1 at single and 1.4±0.1 tC·ha^–1·season^–1 double mowing is accompanied by an increase in carbon loss due to CO2 emissions, i.e., the growth of NEE by 0.3±0.1 and 1.3±0.6 tC·ha–1·season–1, respectively. This corresponds to the growth of NEE for each ton of withdrawn phytomass per hectare of 0.4±0.2 tС·ha–1·season–1 at single mowing, and 0.9±0.7 tС·ha^–1·season^–1 at double mowing. Therefore, single mowing is more justified in terms of carbon loss than double mowing. Extensive mowing does not increase CO2 emissions into the atmosphere and allows, in addition, to “replace” part of the carbon loss by agricultural production.