Результаты поиска по 'Computing':
Найдено авторов: 1
  1. Wang X.D. (Xin W.N.)
Найдено статей: 403
  1. Minkevich I.G.
    The effect of cell metabolism on biomass yield during the growth on various substrates
    Computer Research and Modeling, 2017, v. 9, no. 6, pp. 993-1014

    Bioenergetic regularities determining the maximal biomass yield in aerobic microbial growth on various substrates have been considered. The approach is based on the method of mass-energy balance and application of GenMetPath computer program package. An equation system describing the balances of quantities of 1) metabolite reductivity and 2) high-energy bonds formed and expended has been formulated. In order to formulate the system, the whole metabolism is subdivided into constructive and energetic partial metabolisms. The constructive metabolism is, in turn, subdivided into two parts: forward and standard. The latter subdivision is based on the choice of nodal metabolites. The forward constructive metabolism is substantially dependent on growth substrate: it converts the substrate into the standard set of nodal metabolites. The latter is, then, converted into biomass macromolecules by the standard constructive metabolism which is the same on various substrates. Variations of flows via nodal metabolites are shown to exert minor effects on the standard constructive metabolism. As a separate case, the growth on substrates requiring the participation of oxygenases and/or oxidase is considered. The bioenergetic characteristics of the standard constructive metabolism are found from a large amount of data for the growth of various organisms on glucose. The described approach can be used for prediction of biomass growth yield on substrates with known reactions of their primary metabolization. As an example, the growth of a yeast culture on ethanol has been considered. The value of maximal growth yield predicted by the method described here showed very good consistency with the value found experimentally.

    Views (last year): 17.
  2. Usanov M.S., Kulberg N.S., Yakovleva T.V., Morozov S.P.
    Determination of CT dose by means of noise analysis
    Computer Research and Modeling, 2018, v. 10, no. 4, pp. 525-533

    The article deals with the process of creating an effective algorithm for determining the amount of emitted quanta from an X-ray tube in computer tomography (CT) studies. An analysis of domestic and foreign literature showed that most of the work in the field of radiometry and radiography takes the tabulated values of X-ray absorption coefficients into account, while individual dose factors are not taken into account at all since many studies are lacking the Dose Report. Instead, an average value is used to simplify the calculation of statistics. In this regard, it was decided to develop a method to detect the amount of ionizing quanta by analyzing the noise of CT data. As the basis of the algorithm, we used Poisson and Gauss distribution mathematical model of owns’ design of logarithmic value. The resulting mathematical model was tested on the CT data of a calibration phantom consisting of three plastic cylinders filled with water, the X-ray absorption coefficient of which is known from the table values. The data were obtained from several CT devices from different manufacturers (Siemens, Toshiba, GE, Phillips). The developed algorithm made it possible to calculate the number of emitted X-ray quanta per unit time. These data, taking into account the noise level and the radiuses of the cylinders, were converted to X-ray absorption values, after which a comparison was made with tabulated values. As a result of this operation, the algorithm used with CT data of various configurations, experimental data were obtained, consistent with the theoretical part and the mathematical model. The results showed good accuracy of the algorithm and mathematical apparatus, which shows reliability of the obtained data. This mathematical model is already used in the noise reduction program of the CT of own design, where it participates as a method of creating a dynamic threshold of noise reduction. At the moment, the algorithm is being processed to work with real data from computer tomography of patients.

    Views (last year): 23. Citations: 1 (RSCI).
  3. Shumov V.V.
    The model of the rationale for the focus of border security efforts at the state level
    Computer Research and Modeling, 2019, v. 11, no. 1, pp. 187-196

    The most important principle of military science and border security is the principle of concentrating the main efforts on the main directions and tasks. At the tactical level, there are many mathematical models for computing the optimal resource allocation by directions and objects, whereas at the state level there are no corresponding models. Using the statistical data on the results of the protection of the US border, an exponential type border production function parameter is calculated that reflects the organizational and technological capabilities of the border guard. The production function determines the dependence of the probability of detaining offenders from the density of border guards per kilometer of the border. Financial indicators in the production function are not taken into account, as the border maintenance budget and border equipment correlate with the number of border agents. The objective function of the border guards is defined — the total prevented damage from detained violators taking into account their expected danger for the state and society, which is to be maximized. Using Slater's condition, the solution of the problem was found — optimal density of border guard was calculated for the regions of the state. Having a model of resource allocation, the example of the three border regions of the United States has also solved the reverse problem — threats in the regions have been assessed based on the known allocation of resources. The expected danger from an individual offender on the US-Canada border is 2–5 times higher than from an offender on the US-Mexican border. The results of the calculations are consistent with the views of US security experts: illegal migrants are mostly detained on the US-Mexican border, while potential terrorists prefer to use other channels of penetration into the US (including the US-Canadian border), where the risks of being detained are minimal. Also, the results of the calculations are consistent with the established practice of border protection: in 2013 the number of border guards outside the checkpoints on the US-Mexican border increased by 2 times compared with 2001, while on the American-Canadian border — 4 times. The practice of border protection and the views of specialists give grounds for approval of the verification of the model.

    Views (last year): 26.
  4. Grinevich A.A., Yakushevich L.V.
    On the computer experiments of Kasman
    Computer Research and Modeling, 2019, v. 11, no. 3, pp. 503-513

    In 2007 Kasman conducted a series of original computer experiments with sine-Gordon kinks moving along artificial DNA sequences. Two sequences were considered. Each consisted of two parts separated by a boundary. The left part of the first sequence contained repeating TTA triplets that encode leucines, and the right part contained repeating CGC triplets that encode arginines. In the second sequence, the left part contained repeating CTG triplets encoding leucines, and the right part contained repeating AGA triplets encoding arginines. When modeling the kink movement, an interesting effect was discovered. It turned out that the kink, moving in one of the sequences, stopped without reaching the end of the sequence, and then “bounced off” as if he had hit a wall. At the same time, the kink movement in the other sequence did not stop during the entire time of the experiment. In these computer experiments, however, a simple DNA model proposed by Salerno was used. It takes into account differences in the interactions of complementary bases within pairs, but does not take into account differences in the moments of inertia of nitrogenous bases and in the distances between the centers of mass of the bases and the sugar-phosphate chain. The question of whether the Kasman effect will continue with the use of more accurate DNA models is still open. In this paper, we investigate the Kasman effect on the basis of a more accurate DNA model that takes both of these differences into account. We obtained the energy profiles of Kasman's sequences and constructed the trajectories of the motion of kinks launched in these sequences with different initial values of the energy. The results of our investigations confirmed the existence of the Kasman effect, but only in a limited interval of initial values of the kink energy and with a certain direction of the kinks movement. In other cases, this effect did not observe. We discussed which of the studied sequences were energetically preferable for the excitation and propagation of kinks.

    Views (last year): 23.
  5. Minkevich I.G.
    Estimation of maximal values of biomass growth yield based on the mass-energy balance of cell metabolism
    Computer Research and Modeling, 2019, v. 11, no. 4, pp. 723-750

    The biomass growth yield is the ratio of the newly synthesized substance of growing cells to the amount of the consumed substrate, the source of matter and energy for cell growth. The yield is a characteristic of the efficiency of substrate conversion to cell biomass. The conversion is carried out by the cell metabolism, which is a complete aggregate of biochemical reactions occurring in the cells.

    This work newly considers the problem of maximal cell growth yield prediction basing on balances of the whole living cell metabolism and its fragments called as partial metabolisms (PM). The following PM’s are used for the present consideration. During growth on any substrate we consider i) the standard constructive metabolism (SCM) which consists of identical pathways during growth of various organisms on any substrate. SCM starts from several standard compounds (nodal metabolites): glucose, acetyl-CoA 2-oxoglutarate, erythrose-4-phosphate, oxaloacetate, ribose-5- phosphate, 3-phosphoglycerate, phosphoenolpyruvate, and pyruvate, and ii) the full forward metabolism (FM) — the remaining part of the whole metabolism. The first one consumes high-energy bonds (HEB) formed by the second one. In this work we examine a generalized variant of the FM, when the possible presence of extracellular products, as well as the possibilities of both aerobic and anaerobic growth are taken into account. Instead of separate balances of each nodal metabolite formation as it was made in our previous work, this work deals at once with the whole aggregate of these metabolites. This makes the problem solution more compact and requiring a smaller number of biochemical quantities and substantially less computational time. An equation expressing the maximal biomass yield via specific amounts of HEB formed and consumed by the partial metabolisms has been derived. It includes the specific HEB consumption by SCM which is a universal biochemical parameter applicable to the wide range of organisms and growth substrates. To correctly determine this parameter, the full constructive metabolism and its forward part are considered for the growth of cells on glucose as the mostly studied substrate. We used here the found earlier properties of the elemental composition of lipid and lipid-free fractions of cell biomass. Numerical study of the effect of various interrelations between flows via different nodal metabolites has been made. It showed that the requirements of the SCM in high-energy bonds and NAD(P)H are practically constants. The found HEB-to-formed-biomass coefficient is an efficient tool for finding estimates of maximal biomass yield from substrates for which the primary metabolism is known. Calculation of ATP-to-substrate ratio necessary for the yield estimation has been made using the special computer program package, GenMetPath.

    Views (last year): 2.
  6. Varshavsky L.E.
    Studying indicators of development of oligopolistic markets on the basis of operational calculus
    Computer Research and Modeling, 2019, v. 11, no. 5, pp. 949-963

    The traditional approach to computing optimal game strategies of firms on oligopolistic markets and of indicators of such markets consists in studying linear dynamical games with quadratic criteria and solving generalized matrix Riccati equations.

    The other approach proposed by the author is based on methods of operational calculus (in particular, Z-transform). This approach makes it possible to achieve economic meaningful decisions under wider field of parameter values. It characterizes by simplicity of computations and by necessary for economic analysis visibility. One of its advantages is that in many cases important for economic practice, it, in contrast to the traditional approach, provides the ability to make calculations using widespread spreadsheets, which allows to study the prospects for the development of oligopolistic markets to a wide range of professionals and consumers.

    The article deals with the practical aspects of determining the optimal Nash–Cournot strategies of participants in oligopolistic markets on the basis of operational calculus, in particular the technique of computing the optimal Nash–Cournot strategies in Excel. As an illustration of the opportinities of the proposed methods of calculation, examples close to the practical problems of forecasting indicators of the markets of high-tech products are studied.

    The results of calculations obtained by the author for numerous examples and real economic systems, both using the obtained relations on the basis of spreadsheets and using extended Riccati equations, are very close. In most of the considered practical problems, the deviation of the indicators calculated in accordance with the two approaches, as a rule, does not exceed 1.5–2%. The highest value of relative deviations (up to 3–5%) is observed at the beginning of the forecasting period. In typical cases, the period of relatively noticeable deviations is 3–5 moments of time. After the transition period, there is almost complete agreement of the values of the required indicators using both approaches.

  7. Khorkov A.V., Khorkov A.V.
    Linear and nonlinear optimization models of multiple covering of a bounded plane domain with circles
    Computer Research and Modeling, 2019, v. 11, no. 6, pp. 1101-1110

    Problems of multiple covering ($k$-covering) of a bounded set $G$ with equal circles of a given radius are well known. They are thoroughly studied under the assumption that $G$ is a finite set. There are several papers concerned with studying this problem in the case where $G$ is a connected set. In this paper, we study the problem of minimizing the number of circles that form a $k$-covering, $k \geqslant 1$, provided that $G$ is a bounded convex plane domain.

    For the above-mentioned problem, we state a 0-1 linear model, a general integer linear model, and a nonlinear model, imposing a constraint on the minimum distance between the centers of covering circles. The latter constraint is due to the fact that in practice one can place at most one device at each point. We establish necessary and sufficient solvability conditions for the linear models and describe one (easily realizable) variant of these conditions in the case where the covered set $G$ is a rectangle.

    We propose some methods for finding an approximate number of circles of a given radius that provide the desired $k$-covering of the set $G$, both with and without constraints on distances between the circles’ centers. We treat the calculated values as approximate upper bounds for the number of circles. We also propose a technique that allows one to get approximate lower bounds for the number of circles that is necessary for providing a $k$-covering of the set $G$. In the general linear model, as distinct from the 0-1 linear model, we require no additional constraint. The difference between the upper and lower bounds for the number of circles characterizes the quality (acceptability) of the constructed $k$-covering.

    We state a nonlinear mathematical model for the $k$-covering problem with the above-mentioned constraints imposed on distances between the centers of covering circles. For this model, we propose an algorithm which (in certain cases) allows one to find more exact solutions to covering problems than those calculated from linear models.

    For implementing the proposed approach, we have developed computer programs and performed numerical experiments. Results of numerical experiments demonstrate the effectiveness of the method.

  8. Vornovskikh P.A., Kim A., Prokhorov I.V.
    The applicability of the approximation of single scattering in pulsed sensing of an inhomogeneous medium
    Computer Research and Modeling, 2020, v. 12, no. 5, pp. 1063-1079

    The mathematical model based on the linear integro-differential Boltzmann equation is considered in this article. The model describes the radiation transfer in the scattering medium irradiated by a point source. The inverse problem for the transfer equation is defined. This problem consists of determining the scattering coefficient from the time-angular distribution of the radiation flux density at a given point in space. The Neumann series representation for solving the radiation transfer equation is analyzed in the study of the inverse problem. The zero member of the series describes the unscattered radiation, the first member of the series describes a single-scattered field, the remaining members of the series describe a multiple-scattered field. When calculating the approximate solution of the radiation transfer equation, the single scattering approximation is widespread to calculated an approximate solution of the equation for regions with a small optical thickness and a low level of scattering. An analytical formula is obtained for finding the scattering coefficient by using this approximation for problem with additional restrictions on the initial data. To verify the adequacy of the obtained formula the Monte Carlo weighted method for solving the transfer equation is constructed and software implemented taking into account multiple scattering in the medium and the space-time singularity of the radiation source. As applied to the problems of high-frequency acoustic sensing in the ocean, computational experiments were carried out. The application of the single scattering approximation is justified, at least, at a sensing range of about one hundred meters and the double and triple scattered fields make the main impact on the formula error. For larger regions, the single scattering approximation gives at the best only a qualitative evaluation of the medium structure, sometimes it even does not allow to determine the order of the parameters quantitative characteristics of the interaction of radiation with matter.

  9. Gubaydullin I.M., Yazovtseva O.S.
    Investigation of the averaged model of coked catalyst oxidative regeneration
    Computer Research and Modeling, 2021, v. 13, no. 1, pp. 149-161

    The article is devoted to the construction and investigation of an averaged mathematical model of an aluminum-cobalt-molybdenum hydrocracking catalyst oxidative regeneration. The oxidative regeneration is an effective means of restoring the activity of the catalyst when its granules are coating with coke scurf.

    The mathematical model of this process is a nonlinear system of ordinary differential equations, which includes kinetic equations for reagents’ concentrations and equations for changes in the temperature of the catalyst granule and the reaction mixture as a result of isothermal reactions and heat transfer between the gas and the catalyst layer. Due to the heterogeneity of the oxidative regeneration process, some of the equations differ from the standard kinetic ones and are based on empirical data. The article discusses the scheme of chemical interaction in the regeneration process, which the material balance equations are compiled on the basis of. It reflects the direct interaction of coke and oxygen, taking into account the degree of coverage of the coke granule with carbon-hydrogen and carbon-oxygen complexes, the release of carbon monoxide and carbon dioxide during combustion, as well as the release of oxygen and hydrogen inside the catalyst granule. The change of the radius and, consequently, the surface area of coke pellets is taken into account. The adequacy of the developed averaged model is confirmed by an analysis of the dynamics of the concentrations of substances and temperature.

    The article presents a numerical experiment for a mathematical model of oxidative regeneration of an aluminum-cobalt-molybdenum hydrocracking catalyst. The experiment was carried out using the Kutta–Merson method. This method belongs to the methods of the Runge–Kutta family, but is designed to solve stiff systems of ordinary differential equations. The results of a computational experiment are visualized.

    The paper presents the dynamics of the concentrations of substances involved in the oxidative regeneration process. A conclusion on the adequacy of the constructed mathematical model is drawn on the basis of the correspondence of the obtained results to physicochemical laws. The heating of the catalyst granule and the release of carbon monoxide with a change in the radius of the granule for various degrees of initial coking are analyzed. There are a description of the results.

    In conclusion, the main results and examples of problems which can be solved using the developed mathematical model are noted.

  10. Sabirov A.I., Katasev A.S., Dagaeva M.V.
    A neural network model for traffic signs recognition in intelligent transport systems
    Computer Research and Modeling, 2021, v. 13, no. 2, pp. 429-435

    This work analyzes the problem of traffic signs recognition in intelligent transport systems. The basic concepts of computer vision and image recognition tasks are considered. The most effective approach for solving the problem of analyzing and recognizing images now is the neural network method. Among all kinds of neural networks, the convolutional neural network has proven itself best. Activation functions such as Relu and SoftMax are used to solve the classification problem when recognizing traffic signs. This article proposes a technology for recognizing traffic signs. The choice of an approach for solving the problem based on a convolutional neural network due to the ability to effectively solve the problem of identifying essential features and classification. The initial data for the neural network model were prepared and a training sample was formed. The Google Colaboratory cloud service with the external libraries for deep learning TensorFlow and Keras was used as a platform for the intelligent system development. The convolutional part of the network is designed to highlight characteristic features in the image. The first layer includes 512 neurons with the Relu activation function. Then there is the Dropout layer, which is used to reduce the effect of overfitting the network. The output fully connected layer includes four neurons, which corresponds to the problem of recognizing four types of traffic signs. An intelligent traffic sign recognition system has been developed and tested. The used convolutional neural network included four stages of convolution and subsampling. Evaluation of the efficiency of the traffic sign recognition system using the three-block cross-validation method showed that the error of the neural network model is minimal, therefore, in most cases, new images will be recognized correctly. In addition, the model has no errors of the first kind, and the error of the second kind has a low value and only when the input image is very noisy.

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International Interdisciplinary Conference "Mathematics. Computing. Education"