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Comparison of complex dynamical systems based on topological data analysis
Computer Research and Modeling, 2023, v. 15, no. 3, pp. 513-525The paper considers the possibility of comparing and classifying dynamical systems based on topological data analysis. Determining the measures of interaction between the channels of dynamic systems based on the HIIA (Hankel Interaction Index Array) and PM (Participation Matrix) methods allows you to build HIIA and PM graphs and their adjacency matrices. For any linear dynamic system, an approximating directed graph can be constructed, the vertices of which correspond to the components of the state vector of the dynamic system, and the arcs correspond to the measures of mutual influence of the components of the state vector. Building a measure of distance (proximity) between graphs of different dynamic systems is important, for example, for identifying normal operation or failures of a dynamic system or a control system. To compare and classify dynamic systems, weighted directed graphs corresponding to dynamic systems are preliminarily formed with edge weights corresponding to the measures of interaction between the channels of the dynamic system. Based on the HIIA and PM methods, matrices of measures of interaction between the channels of dynamic systems are determined. The paper gives examples of the formation of weighted directed graphs for various dynamic systems and estimation of the distance between these systems based on topological data analysis. An example of the formation of a weighted directed graph for a dynamic system corresponding to the control system for the components of the angular velocity vector of an aircraft, which is considered as a rigid body with principal moments of inertia, is given. The method of topological data analysis used in this work to estimate the distance between the structures of dynamic systems is based on the formation of persistent barcodes and persistent landscape functions. Methods for comparing dynamic systems based on topological data analysis can be used in the classification of dynamic systems and control systems. The use of traditional algebraic topology for the analysis of objects does not allow obtaining a sufficient amount of information due to a decrease in the data dimension (due to the loss of geometric information). Methods of topological data analysis provide a balance between reducing the data dimension and characterizing the internal structure of an object. In this paper, topological data analysis methods are used, based on the use of Vietoris-Rips and Dowker filtering to assign a geometric dimension to each topological feature. Persistent landscape functions are used to map the persistent diagrams of the method of topological data analysis into the Hilbert space and then quantify the comparison of dynamic systems. Based on the construction of persistent landscape functions, we propose a comparison of graphs of dynamical systems and finding distances between dynamical systems. For this purpose, weighted directed graphs corresponding to dynamical systems are preliminarily formed. Examples of finding the distance between objects (dynamic systems) are given.
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Numerical modeling of the Kolmogorov flow in a viscous media, forced by the static force periodic in space
Computer Research and Modeling, 2022, v. 14, no. 4, pp. 741-753The main feature of a two-dimensional turbulent flow, constantly excited by an external force, is the appearance of an inverse energy cascade. Due to nonlinear effects, the spatial scale of the vortices created by the external force increases until the growth is stopped by the size of the cell. In the latter case, energy is accumulated at these dimensions. Under certain conditions, accumulation leads to the appearance of a system of coherent vortices. The observed vortices are of the order of the box size and, on average, are isotropic. Numerical simulation is an effective way to study such the processes. Of particular interest is the problem of studying the viscous fluid turbulence in a square cell under excitation by short-wave and long-wave static external forces. Numerical modeling was carried out with a weakly compressible fluid in a two-dimensional square cell with zero boundary conditions. The work shows how the flow characteristics are influenced by the spatial frequency of the external force and the magnitude of the viscosity of the fluid itself. An increase in the spatial frequency of the external force leads to stabilization and laminarization of the flow. At the same time, with an increased spatial frequency of the external force, a decrease in viscosity leads to the resumption of the mechanism of energy transfer along the inverse cascade due to a shift in the energy dissipation region to a region of smaller scales compared to the pump scale.
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Molecular dynamics study of the mechanical properties of a platinum crystal reinforced with carbon nanotube under uniaxial tension
Computer Research and Modeling, 2022, v. 14, no. 5, pp. 1069-1080This article discusses the mechanical properties of carbon nanotube (CNT)-reinforced platinum under uniaxial tensile loading using the molecular dynamics method. A review of current computational and experimental studies on the use of carbon nanotube-reinforced composites from a structural point of view. However, quantitative and qualitative studies of CNTs to improve the properties of composites are still rare. Composite selection is a promising application for platinum alloys in many cases where they may be subjected to mechanical stress, including in biocompatibility sources. Pt-reinforced with CNTs may have additional possibilities for implantation of the implant and at the same time obtain the required mechanical characteristics.
The structure of the composite is composed of a Pt crystal with a face-centered cubic lattice with a constant of 3.92 Å and a carbon nanotube. The Pt matrix has the shape of a cube with dimensions of $43.1541 Å \times 43.1541 Å \times 43.1541 Å$. The hole size in the average platinum dimension is the radius of the carbon nanotube of the «zigzag» type (8,0), which is 2.6 Å. A carbon nanotube is placed in a hole with a radius of 4.2 Å. At such parameters, the maximum energy level was mutually observed. The model under consideration is contained in 320 atomic bombs and 5181 atomic platinum. The volume fraction of deaths in the Pt-C composite is 5.8%. At the first stage of the study, the strain rate was analyzed for stress-strain and energy change during uniaxial action on the Pt-C composite.
Analysis of the strain rate study showed that the consumption yield strength increases with high strain rate, and the elasticity has increased density with decreasing strain rate. This work also increased by 40% for Pt-C, the elasticity of the composite decreased by 42.3%. In general, fracture processes are considered in detail, including plastic deformation on an atomistic scale.
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On possible changes in phytocenoses of the Sea of Azov under climate warming
Computer Research and Modeling, 2017, v. 9, no. 6, pp. 981-991Views (last year): 11.Base long-term modern scenarios of hydrochemical and temperature regimes of the Sea of Azov were considered. New schemes of modeling mechanisms of algal adaptation to changes in the hydrochemical regime and temperature were proposed. In comparison to the traditional ecological-evolutionary schemes, these models have a relatively small dimension, high speed and allow carrying out various calculations on long-term perspective (evolutionally significant times). Based on the ecology-evolutionary model of the lower trophic levels the impact of these environmental factors on the dynamics and microevolution of algae in the Sea of Azov was estimated. In each scenario, the calculations were made for 100 years, with the final values of the variables and parameters not depending on the choice of the initial values. In the process of such asymptotic computer analysis, it was found that as a result of climate warming and temperature adaptation of organisms, the average annual biomass of thermophilic algae (Pyrrophyta and Cyanophyta) naturally increases. However, for a number of diatom algae (Bacillariophyta), even with their temperature adaptation, the average annual biomass may unexpectedly decrease. Probably, this phenomenon is associated with a toughening of competition between species with close temperature parameters of existence. The influence of the variation in the chemical composition of the Don River’s flow on the dynamics of nutrients and algae of the Sea of Azov was also investigated. It turned out that the ratio of organic forms of nitrogen and phosphorus in sea waters varies little. This stabilization phenomenon will take place for all high-productive reservoirs with low flow, due to autochthonous origin of larger part of organic matter in water bodies of this type.
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On the question of choosing the structure of a multivariate regression model on the example of the analysis of burnout factors of artists
Computer Research and Modeling, 2021, v. 13, no. 1, pp. 265-274The article discusses the problem of the influence of the research goals on the structure of the multivariate model of regression analysis (in particular, on the implementation of the procedure for reducing the dimension of the model). It is shown how bringing the specification of the multiple regression model in line with the research objectives affects the choice of modeling methods. Two schemes for constructing a model are compared: the first does not allow taking into account the typology of primary predictors and the nature of their influence on the performance characteristics, the second scheme implies a stage of preliminary division of the initial predictors into groups, in accordance with the objectives of the study. Using the example of solving the problem of analyzing the causes of burnout of creative workers, the importance of the stage of qualitative analysis and systematization of a priori selected factors is shown, which is implemented not by computing means, but by attracting the knowledge and experience of specialists in the studied subject area. The presented example of the implementation of the approach to determining the specification of the regression model combines formalized mathematical and statistical procedures and the preceding stage of the classification of primary factors. The presence of this stage makes it possible to explain the scheme of managing (corrective) actions (softening the leadership style and increasing approval lead to a decrease in the manifestations of anxiety and stress, which, in turn, reduces the severity of the emotional exhaustion of the team members). Preclassification also allows avoiding the combination in one main component of controlled and uncontrolled, regulatory and controlled feature factors, which could worsen the interpretability of the synthesized predictors. On the example of a specific problem, it is shown that the selection of factors-regressors is a process that requires an individual solution. In the case under consideration, the following were consistently used: systematization of features, correlation analysis, principal component analysis, regression analysis. The first three methods made it possible to significantly reduce the dimension of the problem, which did not affect the achievement of the goal for which this task was posed: significant measures of controlling influence on the team were shown. allowing to reduce the degree of emotional burnout of its participants.
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Allocation of steinerpoints in euclidean Steiner tree problem by means of MatLab package
Computer Research and Modeling, 2015, v. 7, no. 3, pp. 707-713Views (last year): 4.The problem of allocation of Steiner points in Euclidean Steiner Tree is considered. The cost of network is sum of building costs and cost of the information transportation. Euclidean Steiner tree problem in the form of topological network design is a good model of this problem.
The package MatLab has the way to solve the second part of this problem — allocate Steiner points under condition that the adjacency matrix is set. The method to get solution has been worked out. The Steiner tree is formed by means of solving of the sequence of "three points" Steiner
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