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Modern methods of mathematical modeling of blood flow using reduced order methods
Computer Research and Modeling, 2018, v. 10, no. 5, pp. 581-604Views (last year): 62. Citations: 2 (RSCI).The study of the physiological and pathophysiological processes in the cardiovascular system is one of the important contemporary issues, which is addressed in many works. In this work, several approaches to the mathematical modelling of the blood flow are considered. They are based on the spatial order reduction and/or use a steady-state approach. Attention is paid to the discussion of the assumptions and suggestions, which are limiting the scope of such models. Some typical mathematical formulations are considered together with the brief review of their numerical implementation. In the first part, we discuss the models, which are based on the full spatial order reduction and/or use a steady-state approach. One of the most popular approaches exploits the analogy between the flow of the viscous fluid in the elastic tubes and the current in the electrical circuit. Such models can be used as an individual tool. They also used for the formulation of the boundary conditions in the models using one dimensional (1D) and three dimensional (3D) spatial coordinates. The use of the dynamical compartment models allows describing haemodynamics over an extended period (by order of tens of cardiac cycles and more). Then, the steady-state models are considered. They may use either total spatial reduction or two dimensional (2D) spatial coordinates. This approach is used for simulation the blood flow in the region of microcirculation. In the second part, we discuss the models, which are based on the spatial order reduction to the 1D coordinate. The models of this type require relatively small computational power relative to the 3D models. Within the scope of this approach, it is also possible to include all large vessels of the organism. The 1D models allow simulation of the haemodynamic parameters in every vessel, which is included in the model network. The structure and the parameters of such a network can be set according to the literature data. It also exists methods of medical data segmentation. The 1D models may be derived from the 3D Navier – Stokes equations either by asymptotic analysis or by integrating them over a volume. The major assumptions are symmetric flow and constant shape of the velocity profile over a cross-section. These assumptions are somewhat restrictive and arguable. Some of the current works paying attention to the 1D model’s validation, to the comparing different 1D models and the comparing 1D models with clinical data. The obtained results reveal acceptable accuracy. It allows concluding, that the 1D approach can be used in medical applications. 1D models allow describing several dynamical processes, such as pulse wave propagation, Korotkov’s tones. Some physiological conditions may be included in the 1D models: gravity force, muscles contraction force, regulation and autoregulation.
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Features of numerical solutions of some problems for cnoidal waves as periodic solutions of the Korteweg – de Vries
Computer Research and Modeling, 2021, v. 13, no. 5, pp. 885-901This article discusses the features of the numerical solutions of some problems for cnoidal waves, which are periodic solutions of the classical Korteweg – de Vries equation of the traveling wave type. Exact solutions describing these waves were obtained by communicating the autowave approximation of the Korteweg – de Vries equation to ordinary functions of the third, second, and finally, first orders. Referring to a numerical example shows that in this way ordinary differential equations are not equivalent. The theorem formulated and proved in this article and the remark to it include the set of solutions of the first and second order, which, in their ordinal, are not equivalent. The ordinary differential equation of the first order obtained by the autowave approximation for the description of a cnoidal wave (a periodic solution) and a soliton (a solitary wave). Despite this, from a computational point of view, this equation is the most inconvenient. For this equation, the Lipschitz condition for the sought-for function is not satisfied in the neighborhood of constant solutions. Hence, the existence theorem and the unique solutions of the Cauchy problem for an ordinary differential equation of the first order are not valid. In particular, the uniqueness of the solution to the Cauchy problem is violated at stationary points. Therefore, for an ordinary differential equation of the first order, obtained from the Korteweg – de Vries equation, both in the case of a cnoidal wave and in the case of a soliton, the Cauchy problem cannot be posed at the extremum points. The first condition can be a set position between adjacent extremum points. But for the second, third and third orders, the initial conditions can be set at the growth points and at the extremum points. In this case, the segment for the numerical solution greatly expands and periodicity is observed. For the solutions of these ordinary solutions, the statements of the Cauchy problems are studied, and the results are compared with exact solutions and with each other. A numerical realization of the transformation of a cnoidal wave into a soliton is shown. The results of the article have a hemodynamic interpretation of the pulsating blood flow in a cylindrical blood vessel consisting of elastic rings.
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Buckling problems of thin elastic shells
Computer Research and Modeling, 2018, v. 10, no. 6, pp. 775-787Views (last year): 23.The article covers several mathematical problems relating to elastic stability of thin shells in view of inconsistencies that have been recently identified between the experimental data and the predictions based on the shallow- shell theory. It is highlighted that the contradictions were caused by new algorithms that enabled updating the values of the so called “low critical stresses” calculated in the 20th century and adopted as a buckling criterion for thin shallow shells by technical standards. The new calculations often find the low critical stress close to zero. Therefore, the low critical stress cannot be used as a safety factor for the buckling analysis of the thinwalled structure, and the equations of the shallow-shell theory need to be replaced with other differential equations. The new theory also requires a buckling criterion ensuring the match between calculations and experimental data.
The article demonstrates that the contradiction with the new experiments can be resolved within the dynamic nonlinear three-dimensional theory of elasticity. The stress when bifurcation of dynamic modes occurs shall be taken as a buckling criterion. The nonlinear form of original equations causes solitary (solitonic) waves that match non-smooth displacements (patterns, dents) of the shells. It is essential that the solitons make an impact at all stages of loading and significantly increase closer to bifurcation. The solitonic solutions are illustrated based on the thin cylindrical momentless shell when its three-dimensional volume is simulated with twodimensional surface of the set thickness. It is noted that the pattern-generating waves can be detected (and their amplitudes can by identified) with acoustic or electromagnetic devices.
Thus, it is technically possible to reduce the risk of failure of the thin shells by monitoring the shape of the surface with acoustic devices. The article concludes with a setting of the mathematical problems requiring the solution for the reliable numerical assessment of the buckling criterion for thin elastic shells.
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Application of the grid-characteristic method for mathematical modeling in dynamical problems of deformable solid mechanics
Computer Research and Modeling, 2019, v. 11, no. 6, pp. 1041-1048 -
Overset grids approach for topography modeling in elastic-wave modeling using the grid-characteristic method
Computer Research and Modeling, 2019, v. 11, no. 6, pp. 1049-1059While modeling seismic wave propagation, it is important to take into account nontrivial topography, as this topography causes multiple complex phenomena, such as diffraction at rough surfaces, complex propagation of Rayleigh waves, and side effects caused by wave interference. The primary goal of this research is to construct a method that implements the free surface on topography, utilizing an overset curved grid for characterization, while keeping the main grid structured rectangular. For a combination of the regular and curve-linear grid, the workability of the grid characteristics method using overset grids (also known as the Chimera grid approach) is analyzed. One of the benefits of this approach is computational complexity reduction, caused by the fact that simulation in a regular, homogeneous physical area using a sparse regular rectangle grid is simpler. The simplification of the mesh building mechanism (one grid is regular, and the other can be automatically built using surface data) is a side effect. Despite its simplicity, the method we propose allows us to increase the digitalization of fractured regions and minimize the Courant number. This paper contains various comparisons of modeling results produced by the proposed method-based solver, and results produced by the well-known solver specfem2d, as well as previous modeling results for the same problems. The drawback of the method is that an interpolation error can worsen an overall model accuracy and reduce the computational schema order. Some countermeasures against it are described. For this paper, only two-dimensional models are analyzed. However, the method we propose can be applied to the three-dimensional problems with minimal adaptation required.
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Investigation the material properties of a plate by laser ultrasound using the analysis of multiple waves
Computer Research and Modeling, 2019, v. 11, no. 4, pp. 653-673Views (last year): 3.Ultrasound examination of material properties is a precision method for determining their elastic and strength properties in connection with the small wavelength formed in the material after impact of a laser beam. In this paper, the wave processes arising during these measurements are considered in detail. It is shown that full-wave numerical modeling allows us to study in detail the types of waves, topological characteristics of their profile, speed of arrival of waves at various points, identification the types of waves whose measurements are most optimal for examining a sample made of a specific material of a particular shape, and to develop measurement procedures.
To carry out full-wave modeling, a grid-characteristic method on structured grids was used in this work and a hyperbolic system of equations that describes the propagation of elastic waves in the material of the thin plate under consideration on a specific example of a ratio of thickness to width of 1:10 was solved.
To simulate an elastic front that arose in the plate due to a laser beam, a model of the corresponding initial conditions was proposed. A comparison of the wave effects that arise during its use in the case of a point source and with the data of physical experiments on the propagation of laser ultrasound in metal plates was made.
A study was made on the basis of which the characteristic topological features of the wave processes under consideration were identified and revealed. The main types of elastic waves arising due to a laser beam are investigated, the possibility of their use for studying the properties of materials is analyzed. A method based on the analysis of multiple waves is proposed. The proposed method for studying the properties of a plate with the help of multiple waves on synthetic data was tested, and it showed good results.
It should be noted that most of the studies of multiple waves are aimed at developing methods for their suppression. Multiple waves are not used to process the results of ultrasound studies due to the complexity of their detection in the recorded data of a physical experiment.
Due to the use of full wave modeling and analysis of spatial dynamic wave processes, multiple waves are considered in detail in this work and it is proposed to divide materials into three classes, which allows using multiple waves to obtain information about the material of the plate.
The main results of the work are the developed problem statements for the numerical simulation of the study of plates of a finite thickness by laser ultrasound; the revealed features of the wave phenomena arising in plates of a finite thickness; the developed method for studying the properties of the plate on the basis of multiple waves; the developed classification of materials.
The results of the studies presented in this paper may be of interest not only for developments in the field of ultrasonic non-destructive testing, but also in the field of seismic exploration of the earth's interior, since the proposed approach can be extended to more complex cases of heterogeneous media and applied in geophysics.
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Full-wave 3D earthquake simulation using the double-couple model and the grid-characteristic method
Computer Research and Modeling, 2019, v. 11, no. 6, pp. 1061-1067One of the destroying natural processes is the initiation of the regional seismic activity. It leads to a large number of human deaths. Much effort has been made to develop precise and robust methods for the estimation of the seismic stability of buildings. One of the most common approaches is the natural frequency method. The obvious drawback of this approach is a low precision due to the model oversimplification. The other method is a detailed simulation of dynamic processes using the finite-element method. Unfortunately, the quality of simulations is not enough due to the difficulty of setting the correct free boundary condition. That is why the development of new numerical methods for seismic stability problems is a high priority nowadays.
The present work is devoted to the study of spatial dynamic processes occurring in geological medium during an earthquake. We describe a method for simulating seismic wave propagation from the hypocenter to the day surface. To describe physical processes, we use a system of partial differential equations for a linearly elastic body of the second order, which is solved numerically by a grid-characteristic method on parallelepiped meshes. The widely used geological hypocenter model, called the “double-couple” model, was incorporated into this numerical algorithm. In this case, any heterogeneities, such as geological layers with curvilinear boundaries, gas and fluid-filled cracks, fault planes, etc., may be explicitly taken into account.
In this paper, seismic waves emitted during the earthquake initiation process are numerically simulated. Two different models are used: the homogeneous half-space and the multilayered geological massif with the day surface. All of their parameters are set based on previously published scientific articles. The adequate coincidence of the simulation results is obtained. And discrepancies may be explained by differences in numerical methods used. The numerical approach described can be extended to more complex physical models of geological media.
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Numerical modelling of seismic waves spread in models with an ice field in the arctic shelf
Computer Research and Modeling, 2020, v. 12, no. 1, pp. 73-82The Arctic region contains large hydrocarbon deposits. The presence of different ice formations, such as icebergs, ice hummocks, ice fields, complicates the process of carrying out seismic works on the territory. The last of them, ice fields, bring multiple reflections, spreading all over the surface of ice, into seismogramms. These multiple reflections are necessary to be taken into account while analyzing the seismograms, and geologists should be able to exclude them in order to obtain the reflected waves from the lower geological layers, including hydrocarbon layers.
In this work, we solve the problem of the seismic waves spread in the heterogeneous medium. The systems of equations for the linear elastic medium and for the acoustic medium describe the geological layers. We present the detailed description of the numerical solution of these systems of equations with the help of the grid-characteristic method. The final 1D transfer equations are solved with the use of the Rusanov scheme of the third order of accuracy. In the work, we examine the way of multiple waves decrease in ice by establishing the source of impulse deep into the ice field on border with water. We present the results of computer modelling of the seismic waves spread in geological layers, where the seismic source of impulse is situated on the contact border between ice and water, and also with the seismic source of impulse on the surface of ice for the 3D case. The results of the numerical modelling are presented by wave fields, graphs of the velocity x-components and seismogramms for the two problem formulations. We carry out the analysis of influence of establishing the source of impulse on the border between ice and water on the decrease of the x-components of seismic wave velocities, on seismogramms and on wave fields. As a result, the model, where the seismic source of impulse is situated on the contact border between ice and water, makes worse the final result. The model with the source of impulse on the surface of ice demonstrates a decrease of the x-components of seismic wave velocities.
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Estimation of anisotropy of seismic response from fractured geological objects
Computer Research and Modeling, 2018, v. 10, no. 2, pp. 231-240Views (last year): 11. Citations: 4 (RSCI).Seismic survey process is the common method of prospecting and exploration of deposits: oil and natural gas. Invented at the beginning of the XX century, it has received significant development and is currently used by almost all service oil companies. Its main advantages are the acceptable cost of fieldwork (in comparison with drilling wells) and the accuracy of estimating the characteristics of the subsurface area. However, with the discovery of non-traditional deposits (for example, the Arctic shelf, the Bazhenov Formation), the task of improving existing and creating new seismic data processing technologies became important. Significant development in this direction is possible with the use of numerical simulation of the propagation of seismic waves in realistic models of the geological medium, since it is possible to specify an arbitrary internal structure of the medium with subsequent evaluation of the synthetic signal-response.
The present work is devoted to the study of spatial dynamic processes occurring in geological medium containing fractured inclusions in the process of seismic exploration. The authors constructed a three-dimensional model of a layered massif containing a layer of fluid-saturated cracks, which makes it possible to estimate the signal-response when the structure of the inhomogeneous inclusion is varied. To describe physical processes, we use a system of equations for a linearly elastic body in partial derivatives of the second order, which is solved numerically by a grid-characteristic method on hexahedral grid. In this case, the crack planes are identified at the stage of constructing the grid, and further an additional correction is used to ensure a correct seismic response for the model parameters typical for geological media.
In the paper, three-component area seismograms with a common explosion point were obtained. On their basis, the effect of the structure of a fractured medium on the anisotropy of the seismic response recorded on the day surface at a different distance from the source was estimated. It is established that the kinematic characteristics of the signal remain constant, while the dynamic characteristics for ordered and disordered models can differ by tens of percents.
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Parallel implementation of the grid-characteristic method in the case of explicit contact boundaries
Computer Research and Modeling, 2018, v. 10, no. 5, pp. 667-678Views (last year): 18.We consider an application of the Message Passing Interface (MPI) technology for parallelization of the program code which solves equation of the linear elasticity theory. The solution of this equation describes the propagation of elastic waves in demormable rigid bodies. The solution of such direct problem of seismic wave propagation is of interest in seismics and geophysics. Our implementation of solver uses grid-characteristic method to make simulations. We consider technique to reduce time of communication between MPI processes during the simulation. This is important when it is necessary to conduct modeling in complex problem formulations, and still maintain the high level of parallelism effectiveness, even when thousands of processes are used. A solution of the problem of effective communication is extremely important when several computational grids with arbirtrary geometry of contacts between them are used in the calculation. The complexity of this task increases if an independent distribution of the grid nodes between processes is allowed. In this paper, a generalized approach is developed for processing contact conditions in terms of nodes reinterpolation from a given section of one grid to a certain area of the second grid. An efficient way of parallelization and establishing effective interprocess communications is proposed. For provided example problems we provide wave fileds and seismograms for both 2D and 3D formulations. It is shown that the algorithm can be realized both on Cartesian and on structured (curvilinear) computational grids. The considered statements demonstrate the possibility of carrying out calculations taking into account the surface topographies and curvilinear geometry of curvilinear contacts between the geological layers. Application of curvilinear grids allows to obtain more accurate results than when calculating only using Cartesian grids. The resulting parallelization efficiency is almost 100% up to 4096 processes (we used 128 processes as a basis to find efficiency). With number of processes larger than 4096, an expected gradual decrease in efficiency is observed. The rate of decline is not great, so at 16384 processes the parallelization efficiency remains at 80%.
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