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Introduction to the theory of complex networks
Computer Research and Modeling, 2010, v. 2, no. 2, pp. 121-141Views (last year): 53. Citations: 107 (RSCI).There was a new direction of studying of the complex systems last years, considering them as networks. Nodes in such networks represent elements of these complex systems, and links between nodes – interactions between elements. These researches deal with real systems, such as biological (metabolic networks of cells, functional networks of a brain, ecological systems), technical (the Internet, WWW, networks of the companies of cellular communication, power grids), social (networks of scientific cooperation, a network of movie actors, a network of acquaintances). It has appeared that these networks have more complex architecture, than classical random networks. In the offered review the basic concepts theory of complex networks are given, and the basic directions of studying of real networks structures are also briefly described.
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Grid-cloud services simulation for NICA project, as a mean of the efficiency increasing of their development
Computer Research and Modeling, 2014, v. 6, no. 5, pp. 635-642Views (last year): 4. Citations: 3 (RSCI).A new grid and cloud services simulation for NICA accelerator complex data storage and processing system are described. This system is focused on improving the efficiency of the grid-cloud systems development by using work quality indicators of some real system to design and predict its evolution. For these purpose the simulation program are combined with real monitoring system of the grid-cloud service through a special database. An example of the program usage to simulate a sufficiently general cloud structure, which can be used for more common purposes, is given.
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FlowVision: Industrial computational fluid dynamics
Computer Research and Modeling, 2017, v. 9, no. 1, pp. 5-20Views (last year): 30. Citations: 8 (RSCI).The work submits new release of the FlowVision software designed for automation of engineering calculations in computational fluid dynamics: FlowVision 3.09.05. The FlowVision software is used for solving different industrial problems. Its popularity is based on the capability to solve complex non-tradition problems involving different physical processes. The paradigm of complete automation of labor-intensive and time-taking processes like grid generation makes FlowVision attractive for many engineers. FlowVision is completely developer-independent software. It includes an advanced graphical interface, the system for specifying a computational project as well as the system for flow visualization on planes, on curvilinear surfaces and in volume by means of different methods: plots, color contours, iso-lines, iso-surfaces, vector fields. Besides that, FlowVision provides tools for calculation of integral characteristics on surfaces and in volumetric regions.
The software is based on the finite-volume approach to approximation of the partial differential equations describing fluid motion and accompanying physical processes. It provides explicit and implicit methods for time integration of these equations. The software includes automated generator of unstructured grid with capability of its local dynamic adaptation. The solver involves two-level parallelism which allows calculations on computers with distributed and shared memory (coexisting in the same hardware). FlowVision incorporates a wide spectrum of physical models: different turbulence models, models for mass transfer accounting for chemical reactions and radioactive decay, several combustion models, a dispersed phase model, an electro-hydrodynamic model, an original VOF model for tracking moving interfaces. It should be noted that turbulence can be simulated within URANS, LES, and ILES approaches. FlowVision simulates fluid motion with velocities corresponding to all possible flow regimes: from incompressible to hypersonic. This is achieved by using an original all-speed velocity-pressure split algorithm for integration of the Navier-Stokes equations.
FlowVision enables solving multi-physic problems with use of different modeling tools. For instance, one can simulate multi-phase flows with use of the VOF method, flows past bodies moving across a stationary grid (within Euler approach), flows in rotary machines with use of the technology of sliding grid. Besides that, the software solves fluid-structure interaction problems using the technology of two-way coupling of FlowVision with finite-element codes. Two examples of solving challenging problems in the FlowVision software are demonstrated in the given article. The first one is splashdown of a spacecraft after deceleration by means of jet engines. This problem is characterized by presence of moving bodies and contact surface between the air and the water in the computational domain. The supersonic jets interact with the air-water interphase. The second problem is simulation of the work of a human heart with artificial and natural valves designed on the basis of tomographic investigations with use of a finite-element model of the heart. This problem is characterized by two-way coupling between the “liquid” computational domain and the finite-element model of the hart muscles.
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On the convergence of the implicit iterative line-by-line recurrence method for solving difference elliptical equations
Computer Research and Modeling, 2017, v. 9, no. 6, pp. 857-880Views (last year): 15. Citations: 1 (RSCI).In the article a theory of the implicit iterative line-by-line recurrence method for solving the systems of finite-difference equations which arise as a result of approximation of the two-dimensional elliptic differential equations on a regular grid is stated. On the one hand, the high effectiveness of the method has confirmed in practice. Some complex test problems, as well as several problems of fluid flow and heat transfer of a viscous incompressible liquid, have solved with its use. On the other hand, the theoretical provisions that explain the high convergence rate of the method and its stability are not yet presented in the literature. This fact is the reason for the present investigation. In the paper, the procedure of equivalent and approximate transformations of the initial system of linear algebraic equations (SLAE) is described in detail. The transformations are presented in a matrix-vector form, as well as in the form of the computational formulas of the method. The key points of the transformations are illustrated by schemes of changing of the difference stencils that correspond to the transformed equations. The canonical form of the method is the goal of the transformation procedure. The correctness of the method follows from the canonical form in the case of the solution convergence. The estimation of norms of the matrix operators is carried out on the basis of analysis of structures and element sets of the corresponding matrices. As a result, the convergence of the method is proved for arbitrary initial vectors of the solution of the problem.
The norm of the transition matrix operator is estimated in the special case of weak restrictions on a desired solution. It is shown, that the value of this norm decreases proportionally to the second power (or third degree, it depends on the version of the method) of the grid step of the problem solution area in the case of transition matrix order increases. The necessary condition of the method stability is obtained by means of simple estimates of the vector of an approximate solution. Also, the estimate in order of magnitude of the optimum iterative compensation parameter is given. Theoretical conclusions are illustrated by using the solutions of the test problems. It is shown, that the number of the iterations required to achieve a given accuracy of the solution decreases if a grid size of the solution area increases. It is also demonstrated that if the weak restrictions on solution are violated in the choice of the initial approximation of the solution, then the rate of convergence of the method decreases essentially in full accordance with the deduced theoretical results.
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CABARET scheme implementation for free shear layer modeling
Computer Research and Modeling, 2017, v. 9, no. 6, pp. 881-903Views (last year): 17.In present paper we reexamine the properties of CABARET numerical scheme formulated for a weakly compressible fluid flow basing the results of free shear layer modeling. Kelvin–Helmholtz instability and successive generation of two-dimensional turbulence provide a wide field for a scheme analysis including temporal evolution of the integral energy and enstrophy curves, the vorticity patterns and energy spectra, as well as the dispersion relation for the instability increment. The most part of calculations is performed for Reynolds number $\text{Re} = 4 \times 10^5$ for square grids sequentially refined in the range of $128^2-2048^2$ nodes. An attention is paid to the problem of underresolved layers generating a spurious vortex during the vorticity layers roll-up. This phenomenon takes place only on a coarse grid with $128^2$ nodes, while the fully regularized evolution pattern of vorticity appears only when approaching $1024^2$-node grid. We also discuss the vorticity resolution properties of grids used with respect to dimensional estimates for the eddies at the borders of the inertial interval, showing that the available range of grids appears to be sufficient for a good resolution of small–scale vorticity patches. Nevertheless, we claim for the convergence achieved for the domains occupied by large-scale structures.
The generated turbulence evolution is consistent with theoretical concepts imposing the emergence of large vortices, which collect all the kinetic energy of motion, and solitary small-scale eddies. The latter resemble the coherent structures surviving in the filamentation process and almost noninteracting with other scales. The dissipative characteristics of numerical method employed are discussed in terms of kinetic energy dissipation rate calculated directly and basing theoretical laws for incompressible (via enstrophy curves) and compressible (with respect to the strain rate tensor and dilatation) fluid models. The asymptotic behavior of the kinetic energy and enstrophy cascades comply with two-dimensional turbulence laws $E(k) \propto k^{−3}, \omega^2(k) \propto k^{−1}$. Considering the instability increment as a function of dimensionless wave number shows a good agreement with other papers, however, commonly used method of instability growth rate calculation is not always accurate, so some modification is proposed. Thus, the implemented CABARET scheme possessing remarkably small numerical dissipation and good vorticity resolution is quite competitive approach compared to other high-order accuracy methods
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Simulation of unsteady structure of flow over descent module in the Martian atmosphere conditions
Computer Research and Modeling, 2022, v. 14, no. 4, pp. 701-714The article presents the results of numerical modeling of the vortex spatial non-stationary motion of the medium arising near the lateral and bottom surfaces of the descent module during its movement in the atmosphere of Mars. The numerical study was performed for the high-speed streamline regime at various angles of attack. Mathematical modeling was carried out on the basis of the Navier – Stokes model and the model of equilibrium chemical reactions for the Martian atmosphere gas. The simulation results showed that under the considered conditions of the descent module motion, a non-stationary flow with a pronounced vortex character is realized near its lateral and bottom surfaces. Numerical calculations indicate that, depending on the angle of attack, the nonstationarity and vortex nature of the flow can manifest itself both on the entire lateral and bottom surfaces of the module, and, partially, on their leeward side. For various angles of attack, pictures of the vortex structure of the flow near the surface of the descent vehicle and in its near wake are presented, as well as pictures of the gas-dynamic parameters fields. The non-stationary nature of the flow is confirmed by the presented time dependences of the gas-dynamic parameters of the flow at various points on the module surface. The carried out parametric calculations made it possible to determine the dependence of the aerodynamic characteristics of the descent module on the angle of attack. Mathematical modeling is carried out on the basis of the conservative numerical method of fluxes, which is a finitevolume method based on a finite-difference writing of the conservation laws of additive characteristics of the medium using «upwind» approximations of stream variables. To simulate the complex vortex structure of the flow over descent module, the nonuniform computational grids are used, including up to 30 million finite volumes with exponential thickening to the surface, which made it possible to reveal small-scale vortex formations. Numerical investigations were carried out on the basis of the developed software package based on parallel algorithms of the used numerical method and implemented on modern multiprocessor computer systems. The results of numerical simulation presented in the article were obtained using up to two thousand computing cores of a multiprocessor complex.
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Numerical solving of an inverse problem of a hyperbolic heat equation with small parameter
Computer Research and Modeling, 2023, v. 15, no. 2, pp. 245-258In this paper we describe an algorithm of numerical solving of an inverse problem on a hyperbolic heat equation with additional second time derivative with a small parameter. The problem in this case is finding an initial distribution with given final distribution. This algorithm allows finding a solution to the problem for any admissible given precision. Algorithm allows evading difficulties analogous to the case of heat equation with inverted time. Furthermore, it allows finding an optimal grid size by learning on a relatively big grid size and small amount of iterations of a gradient method and later extrapolates to the required grid size using Richardson’s method. This algorithm allows finding an adequate estimate of Lipschitz constant for the gradient of the target functional. Finally, this algorithm may easily be applied to the problems with similar structure, for example in solving equations for plasma, social processes and various biological problems. The theoretical novelty of the paper consists in the developing of an optimal procedure of finding of the required grid size using Richardson extrapolations for optimization problems with inexact gradient in ill-posed problems.
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Numerical simulation of frequency dependence of dielectric permittivity and electrical conductivity of saturated porous media
Computer Research and Modeling, 2016, v. 8, no. 5, pp. 765-773Views (last year): 8.This article represents numerical simulation technique for determining effective spectral electromagnetic properties (effective electrical conductivity and relative dielectric permittivity) of saturated porous media. Information about these properties is vastly applied during the interpretation of petrophysical exploration data of boreholes and studying of rock core samples. The main feature of the present paper consists in the fact, that it involves three-dimensional saturated digital rock models, which were constructed based on the combined data considering microscopic structure of the porous media and the information about capillary equilibrium of oil-water mixture in pores. Data considering microscopic structure of the model are obtained by means of X-ray microscopic tomography. Information about distributions of saturating fluids is based on hydrodynamic simulations with density functional technique. In order to determine electromagnetic properties of the numerical model time-domain Fourier transform of Maxwell equations is considered. In low frequency approximation the problem can be reduced to solving elliptic equation for the distribution of complex electric potential. Finite difference approximation is based on discretization of the model with homogeneous isotropic orthogonal grid. This discretization implies that each computational cell contains exclusively one medium: water, oil or rock. In order to obtain suitable numerical model the distributions of saturating components is segmented. Such kind of modification enables avoiding usage of heterogeneous grids and disregards influence on the results of simulations of the additional techniques, required in order to determine properties of cells, filled with mixture of media. Corresponding system of differential equations is solved by means of biconjugate gradient stabilized method with multigrid preconditioner. Based on the results of complex electric potential computations average values of electrical conductivity and relative dielectric permittivity is calculated. For the sake of simplicity, this paper considers exclusively simulations with no spectral dependence of conductivities and permittivities of model components. The results of numerical simulations of spectral dependence of effective characteristics of heterogeneously saturated porous media (electrical conductivity and relative dielectric permittivity) in broad range of frequencies and multiple water saturations are represented in figures and table. Efficiency of the presented approach for determining spectral electrical properties of saturated rocks is discussed in conclusion.
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Application of Turbulence Problem Solver (TPS) software complex for numerical modeling of the interaction between laser radiation and metals
Computer Research and Modeling, 2018, v. 10, no. 5, pp. 619-630Views (last year): 15.The work is dedicated to the use of the software package Turbulence Problem Solver (TPS) for numerical simulation of a wide range of laser problems. The capabilities of the package are demonstrated by the example of numerical simulation of the interaction of femtosecond laser pulses with thin metal bonds. The software package TPS developed by the authors is intended for numerical solution of hyperbolic systems of differential equations on multiprocessor computing systems with distributed memory. The package is a modern and expandable software product. The architecture of the package gives the researcher the opportunity to model different physical processes in a uniform way, using different numerical methods and program blocks containing specific initial conditions, boundary conditions and source terms for each problem. The package provides the the opportunity to expand the functionality of the package by adding new classes of problems, computational methods, initial and boundary conditions, as well as equations of state of matter. The numerical methods implemented in the software package were tested on test problems in one-dimensional, two-dimensional and three-dimensional geometry, which included Riemann's problems on the decay of an arbitrary discontinuity with different configurations of the exact solution.
Thin films on substrates are an important class of targets for nanomodification of surfaces in plasmonics or sensor applications. Many articles are devoted to this subject. Most of them, however, focus on the dynamics of the film itself, paying little attention to the substrate, considering it simply as an object that absorbs the first compression wave and does not affect the surface structures that arise as a result of irradiation. The paper describes in detail a computational experiment on the numerical simulation of the interaction of a single ultrashort laser pulse with a gold film deposited on a thick glass substrate. The uniform rectangular grid and the first-order Godunov numerical method were used. The presented results of calculations allowed to confirm the theory of the shock-wave mechanism of holes formation in the metal under femtosecond laser action for the case of a thin gold film with a thickness of about 50 nm on a thick glass substrate.
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Modeling the influence of repetitively pulsed heating on the formation of perturbations at the boundary of a transverse jet in a supersonic crossflow
Computer Research and Modeling, 2023, v. 15, no. 4, pp. 845-860When a supersonic air flow interacts with a transverse secondary jet injected into this flow through an orifice on a flat wall, a special flow structure is formed. This flow takes place during fuel injection into combustion chambers of supersonic aircraft engines; therefore, in recent years, various approaches to intensifying gas mixing in this type of flow have been proposed and studied in several countries. The approach proposed in this work implies using spark discharges for pulsed heating of the gas and generating the instabilities in the shear layer at the boundary of the secondary jet. Using simulation in the software package FlowVision 3.13, the characteristics of this flow were obtained in the absence and presence of pulsed-periodic local heat release on the wall on the windward side of the injector opening. A comparison was made of local characteristics at different periodicities of pulsed heating (corresponding to the values of the Strouhal number 0.25 and 0.31). It is shown that pulsed heating can stimulate the formation of perturbations in the shear layer at the jet boundary. For the case of the absence of heating and for two modes of pulsed heating, the values of an integral criterion for mixing efficiency were calculated. It is shown that pulsed heating can lead both to a decrease in the average mixing efficiency and to its increase (up to 9% in the considered heating mode). The calculation method used (unsteady Reynolds-averaged Navier – Stokes equations with a modified $k-\varepsilon$ turbulence model) was validated by considering a typical case of the secondary transverse jet interaction with a supersonic flow, which was studied by several independent research groups and well documented in the literature. The grid convergence was shown for the simulation of this typical case in FlowVision. A quantitative comparison was made of the results obtained from FlowVision calculations with experimental data and calculations in other programs. The results of this study can be useful for specialists dealing with the problems of gas mixing and combustion in a supersonic flow, as well as the development of engines for supersonic aviation.
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