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Global bifurcation analysis of a rational Holling system
Computer Research and Modeling, 2017, v. 9, no. 4, pp. 537-545Views (last year): 11.In this paper, we consider a quartic family of planar vector fields corresponding to a rational Holling system which models the dynamics of the populations of predators and their prey in a given ecological or biomedical system and which is a variation on the classical Lotka–Volterra system. For the latter system, the change of the prey density per unit of time per predator called the response function is proportional to the prey density. This means that there is no saturation of the predator when the amount of available prey is large. However, it is more realistic to consider a nonlinear and bounded response function, and in fact different response functions have been used in the literature to model the predator response. After algebraic transformations, the rational Holling system can be written in the form of a quartic dynamical system. To investigate the character and distribution of the singular points in the phase plane of the quartic system, we use our method the sense of which is to obtain the simplest (well-known) system by vanishing some parameters (usually field rotation parameters) of the original system and then to input these parameters successively one by one studying the dynamics of the singular points (both finite and infinite) in the phase plane. Using the obtained information on singular points and applying our geometric approach to the qualitative analysis, we study the limit cycle bifurcations of the quartic system. To control all of the limit cycle bifurcations, especially, bifurcations of multiple limit cycles, it is necessary to know the properties and combine the effects of all of the rotation parameters. It can be done by means of the Wintner–Perko termination principle stating that the maximal one-parameter family of multiple limit cycles terminates either at a singular point which is typically of the same multiplicity (cyclicity) or on a separatrix cycle which is also typically of the same multiplicity (cyclicity). Applying this principle, we prove that the quartic system (and the corresponding rational Holling system) can have at most two limit cycles surrounding one singular point.
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Space-marching algorithm for solving radiative transfer problem based on short-characteristics method
Computer Research and Modeling, 2014, v. 6, no. 2, pp. 203-215Views (last year): 10. Citations: 3 (RSCI).A procedure of approximate solving of the radiation transfer problem is presented. The approximated solution is being built successively from the domain border along the direction of radiation propagation. The algorithm was tested for model problem of hot ball radiation.
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Mathematical modeling of the mechanism of a reproductive strategies differentiation in natural populations (on the example of arctic fox, Alopex lagopus)
Computer Research and Modeling, 2016, v. 8, no. 2, pp. 213-228Views (last year): 7. Citations: 5 (RSCI).This paper considers the integrated approach to modeling the dynamics of genetic structure and the number of natural population. A set of dynamic models with different types of natural selection is used to describe a possible mechanism for the fixing of a genetic diversity in size of the litter in coastal, continental and farmed populations of arctic fox (Alopex lagopus, Canidae, Carnivora) observed now. The most interesting results have been obtained with the model of population consisting of two stages of development. At that with the frame of this model a dynamics of population genetic structure on genotypes was analyzed to consider different reproductive abilities and fitnesses of pups on the early stage of lifecycle which defined by the single diallelic gene. This model allows to receive a monomorphism for coastal populations of arctic fox, where food resources are practically constant. As well the model allows polymorphism with cyclical fluctuations in the number and frequency of the gene in the continental populations due to regular fluctuating of rodent number, the major component of its food. In farmed populations by selective selection carried out by farmers to increase the reproductive success, this gene is a pleiotropic one (i. e., determining the survival rate of individuals both early and late stages of their life cycle); so an application of appropriate model (with the selection of pleiotropic gene) allows to get an adequate rate of elimination for small litters allele.
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The iterations’ number estimation for strongly polynomial linear programming algorithms
Computer Research and Modeling, 2024, v. 16, no. 2, pp. 249-285A direct algorithm for solving a linear programming problem (LP), given in canonical form, is considered. The algorithm consists of two successive stages, in which the following LP problems are solved by a direct method: a non-degenerate auxiliary problem at the first stage and some problem equivalent to the original one at the second. The construction of the auxiliary problem is based on a multiplicative version of the Gaussian exclusion method, in the very structure of which there are possibilities: identification of incompatibility and linear dependence of constraints; identification of variables whose optimal values are obviously zero; the actual exclusion of direct variables and the reduction of the dimension of the space in which the solution of the original problem is determined. In the process of actual exclusion of variables, the algorithm generates a sequence of multipliers, the main rows of which form a matrix of constraints of the auxiliary problem, and the possibility of minimizing the filling of the main rows of multipliers is inherent in the very structure of direct methods. At the same time, there is no need to transfer information (basis, plan and optimal value of the objective function) to the second stage of the algorithm and apply one of the ways to eliminate looping to guarantee final convergence.
Two variants of the algorithm for solving the auxiliary problem in conjugate canonical form are presented. The first one is based on its solution by a direct algorithm in terms of the simplex method, and the second one is based on solving a problem dual to it by the simplex method. It is shown that both variants of the algorithm for the same initial data (inputs) generate the same sequence of points: the basic solution and the current dual solution of the vector of row estimates. Hence, it is concluded that the direct algorithm is an algorithm of the simplex method type. It is also shown that the comparison of numerical schemes leads to the conclusion that the direct algorithm allows to reduce, according to the cubic law, the number of arithmetic operations necessary to solve the auxiliary problem, compared with the simplex method. An estimate of the number of iterations is given.
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Problem of material radiation coefficients approximation at a given energy band
Computer Research and Modeling, 2014, v. 6, no. 2, pp. 217-230The problem of formation of a material, which has the coefficients of attenuations and scattering close or coinciding with the same coefficients for some other predetermined material was considered. A computer processing of values of these coefficients for a big set of various materials has been carried out and their dependence on radiation energy value was studied. The conclusion was drawn about probability of successful solution of the problem in many cases and difficulties, which may occur were pointed out. A set of computer calculations carried out for some specific materials is provided.
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Comparative analysis of finite difference method and finite volume method for unsteady natural convection and thermal radiation in a cubical cavity filled with a diathermic medium
Computer Research and Modeling, 2017, v. 9, no. 4, pp. 567-578Views (last year): 13. Citations: 1 (RSCI).Comparative analysis of two numerical methods for simulation of unsteady natural convection and thermal surface radiation within a differentially heated cubical cavity has been carried out. The considered domain of interest had two isothermal opposite vertical faces, while other walls are adiabatic. The walls surfaces were diffuse and gray, namely, their directional spectral emissivity and absorptance do not depend on direction or wavelength but can depend on surface temperature. For the reflected radiation we had two approaches such as: 1) the reflected radiation is diffuse, namely, an intensity of the reflected radiation in any point of the surface is uniform for all directions; 2) the reflected radiation is uniform for each surface of the considered enclosure. Mathematical models formulated both in primitive variables “velocity–pressure” and in transformed variables “vector potential functions – vorticity vector” have been performed numerically using finite volume method and finite difference methods, respectively. It should be noted that radiative heat transfer has been analyzed using the net-radiation method in Poljak approach.
Using primitive variables and finite volume method for the considered boundary-value problem we applied power-law for an approximation of convective terms and central differences for an approximation of diffusive terms. The difference motion and energy equations have been solved using iterative method of alternating directions. Definition of the pressure field associated with velocity field has been performed using SIMPLE procedure.
Using transformed variables and finite difference method for the considered boundary-value problem we applied monotonic Samarsky scheme for convective terms and central differences for diffusive terms. Parabolic equations have been solved using locally one-dimensional Samarsky scheme. Discretization of elliptic equations for vector potential functions has been conducted using symmetric approximation of the second-order derivatives. Obtained difference equation has been solved by successive over-relaxation method. Optimal value of the relaxation parameter has been found on the basis of computational experiments.
As a result we have found the similar distributions of velocity and temperature in the case of these two approaches for different values of Rayleigh number, that illustrates an operability of the used techniques. The efficiency of transformed variables with finite difference method for unsteady problems has been shown.
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CABARET scheme implementation for free shear layer modeling
Computer Research and Modeling, 2017, v. 9, no. 6, pp. 881-903Views (last year): 17.In present paper we reexamine the properties of CABARET numerical scheme formulated for a weakly compressible fluid flow basing the results of free shear layer modeling. Kelvin–Helmholtz instability and successive generation of two-dimensional turbulence provide a wide field for a scheme analysis including temporal evolution of the integral energy and enstrophy curves, the vorticity patterns and energy spectra, as well as the dispersion relation for the instability increment. The most part of calculations is performed for Reynolds number $\text{Re} = 4 \times 10^5$ for square grids sequentially refined in the range of $128^2-2048^2$ nodes. An attention is paid to the problem of underresolved layers generating a spurious vortex during the vorticity layers roll-up. This phenomenon takes place only on a coarse grid with $128^2$ nodes, while the fully regularized evolution pattern of vorticity appears only when approaching $1024^2$-node grid. We also discuss the vorticity resolution properties of grids used with respect to dimensional estimates for the eddies at the borders of the inertial interval, showing that the available range of grids appears to be sufficient for a good resolution of small–scale vorticity patches. Nevertheless, we claim for the convergence achieved for the domains occupied by large-scale structures.
The generated turbulence evolution is consistent with theoretical concepts imposing the emergence of large vortices, which collect all the kinetic energy of motion, and solitary small-scale eddies. The latter resemble the coherent structures surviving in the filamentation process and almost noninteracting with other scales. The dissipative characteristics of numerical method employed are discussed in terms of kinetic energy dissipation rate calculated directly and basing theoretical laws for incompressible (via enstrophy curves) and compressible (with respect to the strain rate tensor and dilatation) fluid models. The asymptotic behavior of the kinetic energy and enstrophy cascades comply with two-dimensional turbulence laws $E(k) \propto k^{−3}, \omega^2(k) \propto k^{−1}$. Considering the instability increment as a function of dimensionless wave number shows a good agreement with other papers, however, commonly used method of instability growth rate calculation is not always accurate, so some modification is proposed. Thus, the implemented CABARET scheme possessing remarkably small numerical dissipation and good vorticity resolution is quite competitive approach compared to other high-order accuracy methods
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Numerical solution of Urysohn type nonlinear second kind integral equations by successive quadratures using embedded Dormand and Prince scheme 5(4)
Computer Research and Modeling, 2020, v. 12, no. 2, pp. 275-300We present the iterative algorithm that solves numerically both Urysohn type Fredholm and Volterra nonlinear one-dimensional nonsingular integral equations of the second kind to a specified, modest user-defined accuracy. The algorithm is based on descending recursive sequence of quadratures. Convergence of numerical scheme is guaranteed by fixed-point theorems. Picard’s method of integrating successive approximations is of great importance for the existence theory of integral equations but surprisingly very little appears on numerical algorithms for its direct implementation in the literature. We show that successive approximations method can be readily employed in numerical solution of integral equations. By that the quadrature algorithm is thoroughly designed. It is based on the explicit form of fifth-order embedded Runge–Kutta rule with adaptive step-size self-control. Since local error estimates may be cheaply obtained, continuous monitoring of the quadrature makes it possible to create very accurate automatic numerical schemes and to reduce considerably the main drawback of Picard iterations namely the extremely large amount of computations with increasing recursion depth. Our algorithm is organized so that as compared to most approaches the nonlinearity of integral equations does not induce any additional computational difficulties, it is very simple to apply and to make a program realization. Our algorithm exhibits some features of universality. First, it should be stressed that the method is as easy to apply to nonlinear as to linear equations of both Fredholm and Volterra kind. Second, the algorithm is equipped by stopping rules by which the calculations may to considerable extent be controlled automatically. A compact C++-code of described algorithm is presented. Our program realization is self-consistent: it demands no preliminary calculations, no external libraries and no additional memory is needed. Numerical examples are provided to show applicability, efficiency, robustness and accuracy of our approach.
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Computer model of a perfect-mixing extraction reactor in the format of the component circuits method with non-uniform vector connections
Computer Research and Modeling, 2024, v. 16, no. 3, pp. 599-614The features of the component circuits method (MCC) in modeling chemical-technological systems (CTS) are considered, taking into account its practical significance. The software and algorithmic implementation of which is currently a set of computer modeling programs MARS (Modeling and Automatic Research of Systems). MARS allows the development and analysis of mathematical models with specified experimental parameters. Research and calculations were carried out using a specialized software and hardware complex MARS, which allows the development of mathematical models with specified experimental parameters. In the course of this work, the model of a perfect-mixing reactor was developed in the MARS modeling environment taking into account the physicochemical features of the uranium extraction process in the presence of nitric acid and tributyl phosphate. As results, the curves of changes of the concentration of uranium extracted into the organic phase are presented. The possibility of using MCC for the description and analysis of CTS, including extraction processes, has been confirmed. The use of the obtained results is planned to be used in the development of a virtual laboratory, which will include the main apparatus of the chemical industry, as well as complex technical controlled systems (CTСS) based on them and will allow one to acquire a wide range of professional competencies in working with “digital twins” of real control objects, including gaining initial experience working with the main equipment of the nuclear industry. In addition to the direct applied benefits, it is also assumed that the successful implementation of the domestic complex of computer modeling programs and technologies based on the obtained results will make it possible to find solutions to the problems of organizing national technological sovereignty and import substitution.
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Simulation of convective-radiative heat transfer in a differentially heated rotating cavity
Computer Research and Modeling, 2018, v. 10, no. 2, pp. 195-207Views (last year): 20.Mathematical simulation of unsteady natural convection and thermal surface radiation within a rotating square enclosure was performed. The considered domain of interest had two isothermal opposite walls subjected to constant low and high temperatures, while other walls are adiabatic. The walls were diffuse and gray. The considered cavity rotated with constant angular velocity relative to the axis that was perpendicular to the cavity and crossed the cavity in the center. Mathematical model, formulated in dimensionless transformed variables “stream function – vorticity” using the Boussinesq approximation and diathermic approach for the medium, was performed numerically using the finite difference method. The vorticity dispersion equation and energy equation were solved using locally one-dimensional Samarskii scheme. The diffusive terms were approximated by central differences, while the convective terms were approximated using monotonic Samarskii scheme. The difference equations were solved by the Thomas algorithm. The approximated Poisson equation for the stream function was solved by successive over-relaxation method. Optimal value of the relaxation parameter was found on the basis of computational experiments. Radiative heat transfer was analyzed using the net-radiation method in Poljak approach. The developed computational code was tested using the grid independence analysis and experimental and numerical results for the model problem.
Numerical analysis of unsteady natural convection and thermal surface radiation within the rotating enclosure was performed for the following parameters: Ra = 103–106, Ta = 0–105, Pr = 0.7, ε = 0–0.9. All distributions were obtained for the twentieth complete revolution when one can find the periodic behavior of flow and heat transfer. As a result we revealed that at low angular velocity the convective flow can intensify but the following growth of angular velocity leads to suppression of the convective flow. The radiative Nusselt number changes weakly with the Taylor number.
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