Most viewed papers

51. Tarasyuk I.A., Kravchuk A.S.
    Estimation of natural frequencies of torsional vibrations of a composite nonlinearly viscoelastic shaft
    Computer Research and Modeling, 2018, v. 10, no. 4, pp. 421-430

    The article presents a method for linearization the effective function of material instantaneous deformation in order to generalize the torsional vibration equation to the case of nonlinearly deformable rheologically active shafts. It is considered layered and structurally heterogeneous, on average isotropic shafts made of nonlinearly viscoelastic components. The technique consists in determining the approximate shear modulus by minimizing the root-mean-square deviation in approximation of the effective diagram of instantaneous deformation.

    The method allows to estimate analytically values of natural frequencies of layered and structurally heterogeneous nonlinearly viscoelastic shaft. This makes it possible to significantly reduce resources in vibration analysis, as well as to track changes in values of natural frequencies with changing geometric, physico-mechanical and structural parameters of shafts, which is especially important at the initial stages of modeling and design. In addition, the paper shows that only a pronounced nonlinearity of the effective state equation has an effect on the natural frequencies, and in some cases the nonlinearity in determining the natural frequencies can be neglected.

    As equations of state of the composite material components, the article considers the equations of nonlinear heredity with instantaneous deformation functions in the form of the Prandtl’s bilinear diagrams. To homogenize the state equations of layered shafts, it is applied the Voigt’s hypothesis on the homogeneity of deformations and the Reuss’ hypothesis on the homogeneity of stresses in the volume of a composite body. Using these assumptions, effective secant and tangential shear moduli, proportionality limits, as well as creep and relaxation kernels of longitudinal, axial and transversely layered shafts are obtained. In addition, it is obtained the indicated effective characteristics of a structurally heterogeneous, on average isotropic shaft using the homogenization method previously proposed by the authors, based on the determination of the material deformation parameters by the rule of a mixture for the Voigt’s and the Reuss’ state equations.

    Keywords: composite material, homogenization, torsional vibrations, nonlinear viscoelasticity.
    Views (last year): 27.
52. Babakov A.V., Chechetkin V.M.
    Mathematical simulation of vortex motion in the astrophysical objects on the basis of the gas-dynamic model
    Computer Research and Modeling, 2018, v. 10, no. 5, pp. 631-643

    The application of a conservative numerical method of fluxes is examined for studying the vortex structures in the massive, fast-turned compact astrophysical objects, which are in self-gravity conditions. The simulation is accomplished for the objects with different mass and rotational speed. The pictures of the vortex structure of objects are visualized. In the calculations the gas-dynamic model is used, in which gas is accepted perfected and nonviscous. Numerical procedure is based on the finite-difference approximation of the conservation laws of the additive characteristics of medium for the finite volume. The “upwind” approximations of the densities of distribution of mass, components of momentum and total energy are applied. For the simulation of the objects, which possess fast-spin motion, the control of conservation for the component of moment of momentun is carried out during calculation. Evolutionary calculation is carried out on the basis of the parallel algorithms, realized on the computer complex of cluster architecture. Algorithms are based on the standardized system of message transfer Message Passing Interface (MPI). The blocking procedures of exchange and non-blocking procedures of exchange with control of the completion of operation are used. The parallelization on the space in two or three directions is carried out depending on the size of integration area and parameters of computational grid. For each subarea the parallelization based on the physical factors is carried out also: the calculations of gas dynamics part and gravitational forces are realized on the different processors, that allows to raise the efficiency of algorithms. The real possibility of the direct calculation of gravitational forces by means of the summation of interaction between all finite volumes in the integration area is shown. For the finite volume methods this approach seems to more consecutive than the solution of Poisson’s equation for the gravitational potential. Numerical calculations were carried out on the computer complex of cluster architecture with the peak productivity 523 TFlops. In the calculations up to thousand processors was used.

    Keywords: mathematical simulation, conservative difference schemes, numerical methods, parallel algorithms, gas dynamics, astrophysics, massive stars, gravity, convection, vortex structures, supernovae.
    Views (last year): 27.
53. Abdelhafez M.A., Tsybulin V.G.
    Modeling of anisotropic convection for the binary fluid in porous medium
    Computer Research and Modeling, 2018, v. 10, no. 6, pp. 801-816

    We study an appearance of gravitational convection in a porous medium saturated by the double-diffusive fluid. The rectangle heated from below is considered with anisotropy of media properties. We analyze Darcy – Boussinesq equations for a binary fluid with Soret effect.

    Resulting system for the stream function, the deviation of temperature and concentration is cosymmetric under some additional conditions for the parameters of the problem. It means that the quiescent state (mechanical equilibrium) loses its stability and a continuous family of stationary regimes branches off. We derive explicit formulas for the critical values of the Rayleigh numbers both for temperature and concentration under these conditions of the cosymmetry. It allows to analyze monotonic instability of mechanical equilibrium, the results of corresponding computations are presented.

    A finite-difference discretization of a second-order accuracy is developed with preserving of the cosymmetry of the underlying system. The derived numerical scheme is applied to analyze the stability of mechanical equilibrium.

    The appearance of stationary and nonstationary convective regimes is studied. The neutral stability curves for the mechanical equilibrium are presented. The map for the plane of the Rayleigh numbers (temperature and concentration) are displayed. The impact of the parameters of thermal diffusion on the Rayleigh concentration number is established, at which the oscillating instability precedes the monotonic instability. In the general situation, when the conditions of cosymmetry are not satisfied, the derived formulas of the critical Rayleigh numbers can be used to estimate the thresholds for the convection onset.

    Keywords: convection, binary fluid, porous media, Soret effect, anisotropy, cosymmetry, finite-difference method.
    Views (last year): 27.
54. Editor's note
    Computer Research and Modeling, 2019, v. 11, no. 1, pp. 5-7
    Views (last year): 27.
55. Sekatskaya A.V.
    Equilibrium states of the second kind of the Kuramoto – Sivashinsky equation with the homogeneous Neumann boundary conditions
    Computer Research and Modeling, 2019, v. 11, no. 1, pp. 59-69

    The well-known evolutionary equation of mathematical physics, which in modern mathematical literature is called the Kuramoto – Sivashinsky equation, is considered. In this paper, this equation is studied in the original edition of the authors, where it was proposed, together with the homogeneous Neumann boundary conditions.

    The question of the existence and stability of local attractors formed by spatially inhomogeneous solutions of the boundary value problem under study has been studied. This issue has become particularly relevant recently in connection with the simulation of the formation of nanostructures on the surface of semiconductors under the influence of an ion flux or laser radiation. The question of the existence and stability of second-order equilibrium states has been studied in two different ways. In the first of these, the Galerkin method was used. The second approach is based on using strictly grounded methods of the theory of dynamic systems with infinite-dimensional phase space: the method of integral manifolds, the theory of normal forms, asymptotic methods.

    In the work, in general, the approach from the well-known work of D.Armbruster, D.Guckenheimer, F.Holmes is repeated, where the approach based on the application of the Galerkin method is used. The results of this analysis are substantially supplemented and developed. Using the capabilities of modern computers has helped significantly complement the analysis of this task. In particular, to find all the solutions in the fourand five-term Galerkin approximations, which for the studied boundary-value problem should be interpreted as equilibrium states of the second kind. An analysis of their stability in the sense of A. M. Lyapunov’s definition is also given.

    In this paper, we compare the results obtained using the Galerkin method with the results of a bifurcation analysis of a boundary value problem based on the use of qualitative analysis methods for infinite-dimensional dynamic systems. Comparison of two variants of results showed some limited possibilities of using the Galerkin method.

    Keywords: Kuramoto – Sivashinsky equation, boundary value problem, equilibriums, stability, Galerkin method, computer analysis.
    Views (last year): 27.
56. Shumov V.V.
    The model of the rationale for the focus of border security efforts at the state level
    Computer Research and Modeling, 2019, v. 11, no. 1, pp. 187-196

    The most important principle of military science and border security is the principle of concentrating the main efforts on the main directions and tasks. At the tactical level, there are many mathematical models for computing the optimal resource allocation by directions and objects, whereas at the state level there are no corresponding models. Using the statistical data on the results of the protection of the US border, an exponential type border production function parameter is calculated that reflects the organizational and technological capabilities of the border guard. The production function determines the dependence of the probability of detaining offenders from the density of border guards per kilometer of the border. Financial indicators in the production function are not taken into account, as the border maintenance budget and border equipment correlate with the number of border agents. The objective function of the border guards is defined — the total prevented damage from detained violators taking into account their expected danger for the state and society, which is to be maximized. Using Slater's condition, the solution of the problem was found — optimal density of border guard was calculated for the regions of the state. Having a model of resource allocation, the example of the three border regions of the United States has also solved the reverse problem — threats in the regions have been assessed based on the known allocation of resources. The expected danger from an individual offender on the US-Canada border is 2–5 times higher than from an offender on the US-Mexican border. The results of the calculations are consistent with the views of US security experts: illegal migrants are mostly detained on the US-Mexican border, while potential terrorists prefer to use other channels of penetration into the US (including the US-Canadian border), where the risks of being detained are minimal. Also, the results of the calculations are consistent with the established practice of border protection: in 2013 the number of border guards outside the checkpoints on the US-Mexican border increased by 2 times compared with 2001, while on the American-Canadian border — 4 times. The practice of border protection and the views of specialists give grounds for approval of the verification of the model.

    Keywords: border security, mathematical model, focus of efforts, border production function, violators of the state border, expected danger, optimal density of protection, border statistics.
    Views (last year): 26.
57. Vorontsov K.V., Potapenko A.A.
    Regularization, robustness and sparsity of probabilistic topic models
    Computer Research and Modeling, 2012, v. 4, no. 4, pp. 693-706

    We propose a generalized probabilistic topic model of text corpora which can incorporate heuristics of Bayesian regularization, sampling, frequent parameters update, and robustness in any combinations. Wellknown models PLSA, LDA, CVB0, SWB, and many others can be considered as special cases of the proposed broad family of models. We propose the robust PLSA model and show that it is more sparse and performs better that regularized models like LDA.

    Keywords: text analysis, topic modeling, probabilistic latent semantic analysis, EM-algorithm, latent Dirichlet allocation, Gibbs sampling, Bayesian regularization, perplexity, robusteness.
    Views (last year): 25. Citations: 12 (RSCI).
58. Krivovichev G.V.
    Kinetic equations for modelling of diffusion processes by lattice Boltzmann method
    Computer Research and Modeling, 2017, v. 9, no. 6, pp. 919-936

    The system of linear hyperbolic kinetic equations with the relaxation term of Bhatnagar–Gross–Krook type for modelling of linear diffusion processes by the lattice Boltzmann method is considered. The coefficients of the equations depend on the discrete velocities from the pattern in velocity space. The system may be considered as an alternative mathematical model of the linear diffusion process. The cases of widely-used patterns on speed variables are considered. The case of parametric coefficients takes into account. By application of the method of Chapman–Enskog asymptotic expansion it is obtained, that the system may be reduced to the linear diffusion equation. The expression of the diffusion coefficient is obtained. As a result of the analysis of this expression, the existence of numerical diffusion in solutions obtained by application of lattice Boltzmann equations is demonstrated. Stability analysis is based on the investigation of wave modes defined by the solutions of hyperbolic system. In the cases of some one-dimensional patterns stability analysis may be realized analytically. In other cases the algorithm of numerical stability investigation is proposed. As a result of the numerical investigation stability of the solutions is shown for a wide range of input parameters. The sufficiency of the positivity of the relaxation parameter for the stability of solutions is demonstrated. The dispersion of the solutions, which is not realized for a linear diffusion equation, is demonstrated analytically and numerically for a wide range of the parameters. But the dispersive wave modes can be damped as an asymptotically stable solutions and the behavior of the solution is similar to the solution of linear diffusion equation. Numerical schemes, obtained from the proposed systems by various discretization techniques may be considered as a tool for computer modelling of diffusion processes, or as a solver for stationary problems and in applications of the splitting lattice Boltzmann method. Obtained results may be used for the comparison of the theoretical properties of the difference schemes of the lattice Boltzmann method for modelling of linear diffusion.

    Keywords: lattice Boltzmann method, diffusion, stability, dispersion.
    Views (last year): 25.
59. Bessonov N.M., Bocharov G.A., Bouchnita A., Volpert V.A.
    Hybrid models in biomedical applications
    Computer Research and Modeling, 2019, v. 11, no. 2, pp. 287-309

    The paper presents a review of recent developments of hybrid discrete-continuous models in cell population dynamics. Such models are widely used in the biological modelling. Cells are considered as individual objects which can divide, die by apoptosis, differentiate and move under external forces. In the simplest representation cells are considered as soft spheres, and their motion is described by Newton’s second law for their centers. In a more complete representation, cell geometry and structure can be taken into account. Cell fate is determined by concentrations of intra-cellular substances and by various substances in the extracellular matrix, such as nutrients, hormones, growth factors. Intra-cellular regulatory networks are described by ordinary differential equations while extracellular species by partial differential equations. We illustrate the application of this approach with some examples including bacteria filament and tumor growth. These examples are followed by more detailed studies of erythropoiesis and immune response. Erythrocytes are produced in the bone marrow in small cellular units called erythroblastic islands. Each island is formed by a central macrophage surrounded by erythroid progenitors in different stages of maturity. Their choice between self-renewal, differentiation and apoptosis is determined by the ERK/Fas regulation and by a growth factor produced by the macrophage. Normal functioning of erythropoiesis can be compromised by the development of multiple myeloma, a malignant blood disorder which leads to a destruction of erythroblastic islands and to sever anemia. The last part of the work is devoted to the applications of hybrid models to study immune response and the development of viral infection. A two-scale model describing processes in a lymph node and other organs including the blood compartment is presented.

    Keywords: cell populations, discrete-continuous models, erythropoiesis, immune response.
    Views (last year): 25.
60. Minkevich I.G.
    Incomplete systems of linear equations with restrictions of variable values
    Computer Research and Modeling, 2014, v. 6, no. 5, pp. 719-745

    The problem is formulated for description of objects having various natures which uses a system of linear equations with variable number exceeding the number of the equations. An important feature of this problem that substantially complicates its solving is the existing of restrictions imposed on a number of the variables. In particular, the choice of biochemical reaction aggregate that converts a preset substrate (a feedstock) into a preset product belongs to this kind of problems. In this case, unknown variables are the rates of biochemical reactions which form a vector to be determined. Components of this vector are subdivided into two groups: 1) the defined components, $\vec{y}$; 2) those dependent on the defined ones, $\vec{x}$. Possible configurations of the domain of $\vec{y}$ values permitted by restrictions imposed upon $\vec{x}$ components have been studied. It has been found that a part of restrictions may be superfluous and, therefore, unnecessary for the problem solving. Situations are analyzed when two or more $\vec{x}$ restrictions result in strict interconnections between $\vec{y}$ components. Methods of search of the basis solutions which take into account the peculiarities of this problem are described. Statement of the general problem and properties of its solutions are illustrated using a biochemical example.

    Keywords: linear equations, non-square matrices, linear inequalities, stoichiometry of metabolism, metabolic pathways.
    Views (last year): 24. Citations: 3 (RSCI).

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