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Modern methods of mathematical modeling of blood flow using reduced order methods
Computer Research and Modeling, 2018, v. 10, no. 5, pp. 581-604Views (last year): 62. Citations: 2 (RSCI).The study of the physiological and pathophysiological processes in the cardiovascular system is one of the important contemporary issues, which is addressed in many works. In this work, several approaches to the mathematical modelling of the blood flow are considered. They are based on the spatial order reduction and/or use a steady-state approach. Attention is paid to the discussion of the assumptions and suggestions, which are limiting the scope of such models. Some typical mathematical formulations are considered together with the brief review of their numerical implementation. In the first part, we discuss the models, which are based on the full spatial order reduction and/or use a steady-state approach. One of the most popular approaches exploits the analogy between the flow of the viscous fluid in the elastic tubes and the current in the electrical circuit. Such models can be used as an individual tool. They also used for the formulation of the boundary conditions in the models using one dimensional (1D) and three dimensional (3D) spatial coordinates. The use of the dynamical compartment models allows describing haemodynamics over an extended period (by order of tens of cardiac cycles and more). Then, the steady-state models are considered. They may use either total spatial reduction or two dimensional (2D) spatial coordinates. This approach is used for simulation the blood flow in the region of microcirculation. In the second part, we discuss the models, which are based on the spatial order reduction to the 1D coordinate. The models of this type require relatively small computational power relative to the 3D models. Within the scope of this approach, it is also possible to include all large vessels of the organism. The 1D models allow simulation of the haemodynamic parameters in every vessel, which is included in the model network. The structure and the parameters of such a network can be set according to the literature data. It also exists methods of medical data segmentation. The 1D models may be derived from the 3D Navier – Stokes equations either by asymptotic analysis or by integrating them over a volume. The major assumptions are symmetric flow and constant shape of the velocity profile over a cross-section. These assumptions are somewhat restrictive and arguable. Some of the current works paying attention to the 1D model’s validation, to the comparing different 1D models and the comparing 1D models with clinical data. The obtained results reveal acceptable accuracy. It allows concluding, that the 1D approach can be used in medical applications. 1D models allow describing several dynamical processes, such as pulse wave propagation, Korotkov’s tones. Some physiological conditions may be included in the 1D models: gravity force, muscles contraction force, regulation and autoregulation.
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Modeling the spatial scenario of the transition to chaos via torus breakup in the problem with concentration-dependent diffusion
Computer Research and Modeling, 2020, v. 12, no. 1, pp. 9-31In the last decades, universal scenarios of the transition to chaos in dynamic systems have been well studied. The scenario of the transition to chaos is defined as a sequence of bifurcations that occur in the system under the variation one of the governing parameters and lead to a qualitative change in dynamics, starting from the regular mode and ending with chaotic behavior. Typical scenarios include a cascade of period doubling bifurcations (Feigenbaum scenario), the breakup of a low-dimensional torus (Ruelle–Takens scenario), and the transition to chaos through the intermittency (Pomeau–Manneville scenario). In more complicated spatially distributed dynamic systems, the complexity of dynamic behavior growing with a parameter change is closely intertwined with the formation of spatial structures. However, the question of whether the spatial and temporal axes could completely exchange roles in some scenario still remains open. In this paper, for the first time, we propose a mathematical model of convection–diffusion–reaction, in which a spatial transition to chaos through the breakup of the quasi–periodic regime is realized in the framework of the Ruelle–Takens scenario. The physical system under consideration consists of two aqueous solutions of acid (A) and base (B), initially separated in space and placed in a vertically oriented Hele–Shaw cell subject to the gravity field. When the solutions are brought into contact, the frontal neutralization reaction of the second order A + B $\to$ C begins, which is accompanied by the production of salt (C). The process is characterized by a strong dependence of the diffusion coefficients of the reagents on their concentration, which leads to the appearance of two local zones of reduced density, in which chemoconvective fluid motions develop independently. Although the layers, in which convection develops, all the time remain separated by the interlayer of motionless fluid, they can influence each other via a diffusion of reagents through this interlayer. The emerging chemoconvective structure is the modulated standing wave that gradually breaks down over time, repeating the sequence of the bifurcation chain of the Ruelle–Takens scenario. We show that during the evolution of the system one of the spatial axes, directed along the reaction front, plays the role of time, and time itself starts to play the role of a control parameter.
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Cosmological models of the Universe without a Beginning and without a singularity
Computer Research and Modeling, 2021, v. 13, no. 3, pp. 473-486A new type of cosmological models for the Universe that has no Beginning and evolves from the infinitely distant past is considered.
These models are alternative to the cosmological models based on the Big Bang theory according to which the Universe has a finite age and was formed from an initial singularity.
In our opinion, there are certain problems in the Big Bang theory that our cosmological models do not have.
In our cosmological models, the Universe evolves by compression from the infinitely distant past tending a finite minimum of distances between objects of the order of the Compton wavelength $\lambda_C$ of hadrons and the maximum density of matter corresponding to the hadron era of the Universe. Then it expands progressing through all the stages of evolution established by astronomical observations up to the era of inflation.
The material basis that sets the fundamental nature of the evolution of the Universe in the our cosmological models is a nonlinear Dirac spinor field $\psi(x^k)$ with nonlinearity in the Lagrangian of the field of type $\beta(\bar{\psi}\psi)^n$ ($\beta = const$, $n$ is a rational number), where $\psi(x^k)$ is the 4-component Dirac spinor, and $\psi$ is the conjugate spinor.
In addition to the spinor field $\psi$ in cosmological models, we have other components of matter in the form of an ideal liquid with the equation of state $p = w\varepsilon$ $(w = const)$ at different values of the coefficient $w (−1 < w < 1)$. Additional components affect the evolution of the Universe and all stages of evolution occur in accordance with established observation data. Here $p$ is the pressure, $\varepsilon = \rho c^2$ is the energy density, $\rho$ is the mass density, and $c$ is the speed of light in a vacuum.
We have shown that cosmological models with a nonlinear spinor field with a nonlinearity coefficient $n = 2$ are the closest to reality.
In this case, the nonlinear spinor field is described by the Dirac equation with cubic nonlinearity.
But this is the Ivanenko–Heisenberg nonlinear spinor equation which W.Heisenberg used to construct a unified spinor theory of matter.
It is an amazing coincidence that the same nonlinear spinor equation can be the basis for constructing a theory of two different fundamental objects of nature — the evolving Universe and physical matter.
The developments of the cosmological models are supplemented by their computer researches the results of which are presented graphically in the work.
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Multidimensional nodal method of characteristics for hyperbolic systems
Computer Research and Modeling, 2021, v. 13, no. 1, pp. 19-32Disclosed is a multidimensional nodal method of characteristics, designed to integrate hyperbolic systems, based on splitting the initial system of equations into a number of one-dimensional subsystems, for which a onedimensional nodal method of characteristics is used. Calculation formulas are given, the calculation method is described in detail in relation to a single-speed model of a heterogeneous medium in the presence of gravity forces. The presented method is applicable to other hyperbolic systems of equations. Using this explicit, nonconservative, first-order accuracy of the method, a number of test tasks are calculated and it is shown that in the framework of the proposed approach, by attracting additional points in the circuit template, it is possible to carry out calculations with Courant numbers exceeding one. So, in the calculation of the flow of the threedimensional step by the flow of a heterogeneous mixture, the Courant number was 1.2. If Godunov’s method is used to solve the same problem, the maximum number of Courant, at which a stable account is possible, is 0.13 × 10-2. Another feature of the multidimensional method of characteristics is the weak dependence of the time step on the dimension of the problem, which significantly expands the possibilities of this approach. Using this method, a number of problems were calculated that were previously considered “heavy” for the numerical methods of Godunov, Courant – Isaacson – Rees, which is due to the fact that it most fully uses the advantages of the characteristic representation of the system of equations.
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Method for processing acoustic emission testing data to define signal velocity and location
Computer Research and Modeling, 2022, v. 14, no. 5, pp. 1029-1040Non-destructive acoustic emission testing is an effective and cost-efficient way to examine pressure vessels for hidden defects (cracks, laminations etc.), as well as the only method that is sensitive to developing defects. The sound velocity in the test object and its adequate definition in the location scheme are of paramount importance for the accurate detection of the acoustic emission source. The acoustic emission data processing method proposed herein comprises a set of numerical methods and allows defining the source coordinates and the most probable velocity for each signal. The method includes pre-filtering of data by amplitude, by time differences, elimination of electromagnetic interference. Further, a set of numerical methods is applied to them to solve the system of nonlinear equations, in particular, the Newton – Kantorovich method and the general iterative process. The velocity of a signal from one source is assumed as a constant in all directions. As the initial approximation is taken the center of gravity of the triangle formed by the first three sensors that registered the signal. The method developed has an important practical application, and the paper provides an example of its approbation in the calibration of an acoustic emission system at a production facility (hydrocarbon gas purification absorber). Criteria for prefiltering of data are described. The obtained locations are in good agreement with the signal generation sources, and the velocities even reflect the Rayleigh-Lamb division of acoustic waves due to the different signal source distances from the sensors. The article contains the dependency graph of the average signal velocity against the distance from its source to the nearest sensor. The main advantage of the method developed is its ability to detect the location of different velocity signals within a single test. This allows to increase the degree of freedom in the calculations, and thereby increase their accuracy.
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On contact instabilities of viscoplastic fluids in three-dimensional setting
Computer Research and Modeling, 2018, v. 10, no. 4, pp. 431-444Views (last year): 19.The Richtmyer–Meshkov and the Rayleigh–Taylor instabilities of viscoplastic (or the Bingham) fluids are studied in the three–dimensional formulation of the problem. A numerical modeling of the intermixing of two fluids with different rheology, whose densities differ twice, as a result of instabilities development process has been carried out. The development of the Richtmyer–Meshkov and the Rayleigh–Taylor instabilities of the Bingham fluids is analyzed utilizing the MacCormack and the Volume of Fluid (VOF) methods to reconstruct the interface during the process. Both the results of numerical simulation of the named instabilities of the Bingham liquids and their comparison with theory and the results of the Newtonian fluid simulation are presented. Critical amplitude of the initial perturbation of the contact boundary velocity field at which the development of instabilities begins was estimated. This critical amplitude presents because of the yield stress exists in the Bingham fluids. Results of numerical calculations show that the yield stress of viscoplastic fluids essentially affects the nature of the development of both Rayleigh–Taylor and Richtmyer–Meshkov instabilities. If the amplitude of the initial perturbation is less than the critical value, then the perturbation decays relatively quickly, and no instability develops.When the initial perturbation exceeds the critical amplitude, the nature of the instability development resembles that of the Newtonian fluid. In a case of the Richtmyer–Meshkov instability, the critical amplitudes of the initial perturbation of the contact boundary at different values of the yield stress are estimated. There is a distinction in behavior of the non-Newtonian fluid in a plane case: with the same value of the yield stress in three-dimensional geometry, the range of the amplitude values of the initial perturbation, when fluid starts to transit from rest to motion, is significantly narrower. In addition, it is shown that the critical amplitude of the initial perturbation of the contact boundary for the Rayleigh–Taylor instability is lower than for the Richtmyer–Meshkov instability. This is due to the action of gravity, which helps the instability to develop and counteracts the forces of viscous friction.
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Mathematical simulation of vortex motion in the astrophysical objects on the basis of the gas-dynamic model
Computer Research and Modeling, 2018, v. 10, no. 5, pp. 631-643Views (last year): 27.The application of a conservative numerical method of fluxes is examined for studying the vortex structures in the massive, fast-turned compact astrophysical objects, which are in self-gravity conditions. The simulation is accomplished for the objects with different mass and rotational speed. The pictures of the vortex structure of objects are visualized. In the calculations the gas-dynamic model is used, in which gas is accepted perfected and nonviscous. Numerical procedure is based on the finite-difference approximation of the conservation laws of the additive characteristics of medium for the finite volume. The “upwind” approximations of the densities of distribution of mass, components of momentum and total energy are applied. For the simulation of the objects, which possess fast-spin motion, the control of conservation for the component of moment of momentun is carried out during calculation. Evolutionary calculation is carried out on the basis of the parallel algorithms, realized on the computer complex of cluster architecture. Algorithms are based on the standardized system of message transfer Message Passing Interface (MPI). The blocking procedures of exchange and non-blocking procedures of exchange with control of the completion of operation are used. The parallelization on the space in two or three directions is carried out depending on the size of integration area and parameters of computational grid. For each subarea the parallelization based on the physical factors is carried out also: the calculations of gas dynamics part and gravitational forces are realized on the different processors, that allows to raise the efficiency of algorithms. The real possibility of the direct calculation of gravitational forces by means of the summation of interaction between all finite volumes in the integration area is shown. For the finite volume methods this approach seems to more consecutive than the solution of Poisson’s equation for the gravitational potential. Numerical calculations were carried out on the computer complex of cluster architecture with the peak productivity 523 TFlops. In the calculations up to thousand processors was used.
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Simulation of rail vehicles ride in Simpack Rail on the curved track
Computer Research and Modeling, 2019, v. 11, no. 2, pp. 249-263Views (last year): 20.The paper studies the determination for one of the dynamic quality parameter (PDK) of railway vehicles — car body lateral acceleration — by using of computer simulation system for railway vehicles dynamic Simpack Rail. This provide the complex simulation environment with variable velocity depending on the train schedule. The rail vehicle model of typical 1520 mm gauge fright locomotive section used for simulation has been verified by means of the chair “Electric multiple unit cars and locomotives” in the Russian University of Transport (RUT (MIIT)). Due to this homologation the questions of model creating and verification in preprocessor are excluded in this paper. The paper gives the detail description of cartographic track modeling in situation plane, heights plane and superelevation plane based on the real operating data. The statistic parameters (moments) for the rail related track excitation and used cartographic track data of the specified track section in this simulation are given as a numeric and graphical results of reading the prepared data files. The measurement of the car body residual lateral acceleration occur under consideration of the earth gravity acceleration part like the accelerometer measurement in the real world. Finally the desired quality parameter determined by simulation is compared with the same one given by a test drive. The calculation method in both cases is based on the middle value of the absolute maximums picked up within the nonstationary realizations of this parameter. Compared results confirm that this quality factor all the first depends on the velocity and track geometry properties. The simulation of the track in this application uses the strong conformity original track data of the test ride track section. The accepted simplification in the rail vehicle model of fright electric locomotive section (body properties related to the center of gravity, small displacements between the bodies) by keeping the geometric and force law characteristics of the force elements and constraints constant allow in Simpack Rail the simulation with necessary validity of system behavior (reactions).
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Controlling the movement of the body using internal masses in a viscous liquid
Computer Research and Modeling, 2018, v. 10, no. 4, pp. 445-460Views (last year): 21. Citations: 2 (RSCI).This article is devoted to the study of self-propulsion of bodies in a fluid by the action of internal mechanisms, without changing the external shape of the body. The paper presents an overview of theoretical papers that justify the possibility of this displacement in ideal and viscous liquids.
A special case of self-propulsion of a rigid body along the surface of a liquid is considered due to the motion of two internal masses along the circles. The paper presents a mathematical model of the motion of a solid body with moving internal masses in a three-dimensional formulation. This model takes into account the three-dimensional vibrations of the body during motion, which arise under the action of external forces-gravity force, Archimedes force and forces acting on the body, from the side of a viscous fluid.
The body is a homogeneous elliptical cylinder with a keel located along the larger diagonal. Inside the cylinder there are two material point masses moving along the circles. The centers of the circles lie on the smallest diagonal of the ellipse at an equal distance from the center of mass.
Equations of motion of the system (a body with two material points, placed in a fluid) are represented as Kirchhoff equations with the addition of external forces and moments acting on the body. The phenomenological model of viscous friction is quadratic in velocity used to describe the forces of resistance to motion in a fluid. The coefficients of resistance to movement were determined experimentally. The forces acting on the keel were determined by numerical modeling of the keel oscillations in a viscous liquid using the Navier – Stokes equations.
In this paper, an experimental verification of the proposed mathematical model was carried out. Several series of experiments on self-propulsion of a body in a liquid by means of rotation of internal masses with different speeds of rotation are presented. The dependence of the average propagation velocity, the amplitude of the transverse oscillations as a function of the rotational speed of internal masses is investigated. The obtained experimental data are compared with the results obtained within the framework of the proposed mathematical model.
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Transport modeling: averaging price matrices
Computer Research and Modeling, 2023, v. 15, no. 2, pp. 317-327This paper considers various approaches to averaging the generalized travel costs calculated for different modes of travel in the transportation network. The mode of transportation is understood to mean both the mode of transport, for example, a car or public transport, and movement without the use of transport, for example, on foot. The task of calculating the trip matrices includes the task of calculating the total matrices, in other words, estimating the total demand for movements by all modes, as well as the task of splitting the matrices according to the mode, also called modal splitting. To calculate trip matrices, gravitational, entropy and other models are used, in which the probability of movement between zones is estimated based on a certain measure of the distance of these zones from each other. Usually, the generalized cost of moving along the optimal path between zones is used as a distance measure. However, the generalized cost of movement differs for different modes of movement. When calculating the total trip matrices, it becomes necessary to average the generalized costs by modes of movement. The averaging procedure is subject to the natural requirement of monotonicity in all arguments. This requirement is not met by some commonly used averaging methods, for example, averaging with weights. The problem of modal splitting is solved by applying the methods of discrete choice theory. In particular, within the framework of the theory of discrete choice, correct methods have been developed for averaging the utility of alternatives that are monotonic in all arguments. The authors propose some adaptation of the methods of the theory of discrete choice for application to the calculation of the average cost of movements in the gravitational and entropy models. The transfer of averaging formulas from the context of the modal splitting model to the trip matrix calculation model requires the introduction of new parameters and the derivation of conditions for the possible value of these parameters, which was done in this article. The issues of recalibration of the gravitational function, which is necessary when switching to a new averaging method, if the existing function is calibrated taking into account the use of the weighted average cost, were also considered. The proposed methods were implemented on the example of a small fragment of the transport network. The results of calculations are presented, demonstrating the advantage of the proposed methods.
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