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Procedure for constructing of explicit, implicit and symmetric simplectic schemes for numerical solving of Hamiltonian systems of equations
Computer Research and Modeling, 2016, v. 8, no. 6, pp. 861-871Views (last year): 11.Equations of motion in Newtonian and Hamiltonian forms are used for classical molecular dynamics simulation of particle system time evolution. When Newton equations of motion are used for finding of particle coordinates and velocities in $N$-particle system it takes to solve $3N$ ordinary differential equations of second order at every time step. Traditionally numerical schemes of Verlet method are used for solving Newtonian equations of motion of molecular dynamics. A step of integration is necessary to decrease for Verlet numerical schemes steadiness conservation on sufficiently large time intervals. It leads to a significant increase of the volume of calculations. Numerical schemes of Verlet method with Hamiltonian conservation control (the energy of the system) at every time moment are used in the most software packages of molecular dynamics for numerical integration of equations of motion. It can be used two complement each other approaches to decrease of computational time in molecular dynamics calculations. The first of these approaches is based on enhancement and software optimization of existing software packages of molecular dynamics by using of vectorization, parallelization and special processor construction. The second one is based on the elaboration of efficient methods for numerical integration for equations of motion. A procedure for constructing of explicit, implicit and symmetric symplectic numerical schemes with given approximation accuracy in relation to integration step for solving of molecular dynamic equations of motion in Hamiltonian form is proposed in this work. The approach for construction of proposed in this work procedure is based on the following points: Hamiltonian formulation of equations of motion; usage of Taylor expansion of exact solution; usage of generating functions, for geometrical properties of exact solution conservation, in derivation of numerical schemes. Numerical experiments show that obtained in this work symmetric symplectic third-order accuracy scheme conserves basic properties of the exact solution in the approximate solution. It is more stable for approximation step and conserves Hamiltonian of the system with more accuracy at a large integration interval then second order Verlet numerical schemes.
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Conversion of the initial indices of the technological process of the smelting of steel for the subsequent simulation
Computer Research and Modeling, 2017, v. 9, no. 2, pp. 187-199Views (last year): 6. Citations: 1 (RSCI).Efficiency of production directly depends on quality of the management of technology which, in turn, relies on the accuracy and efficiency of the processing of control and measuring information. Development of the mathematical methods of research of the system communications and regularities of functioning and creation of the mathematical models taking into account structural features of object of researches, and also writing of the software products for realization of these methods are an actual task. Practice has shown that the list of parameters that take place in the study of complex object of modern production, ranging from a few dozen to several hundred names, and the degree of influence of each factor in the initial time is not clear. Before working for the direct determination of the model in these circumstances, it is impossible — the amount of the required information may be too great, and most of the work on the collection of this information will be done in vain due to the fact that the degree of influence on the optimization of most factors of the original list would be negligible. Therefore, a necessary step in determining a model of a complex object is to work to reduce the dimension of the factor space. Most industrial plants are hierarchical group processes and mass volume production, characterized by hundreds of factors. (For an example of realization of the mathematical methods and the approbation of the constructed models data of the Moldavian steel works were taken in a basis.) To investigate the systemic linkages and patterns of functioning of such complex objects are usually chosen several informative parameters, and carried out their sampling. In this article the sequence of coercion of the initial indices of the technological process of the smelting of steel to the look suitable for creation of a mathematical model for the purpose of prediction is described. The implementations of new types became also creation of a basis for development of the system of automated management of quality of the production. In the course of weak correlation the following stages are selected: collection and the analysis of the basic data, creation of the table the correlated of the parameters, abbreviation of factor space by means of the correlative pleiads and a method of weight factors. The received results allow to optimize process of creation of the model of multiple-factor process.
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Neural network analysis of transportation flows of urban aglomeration using the data from public video cameras
Computer Research and Modeling, 2021, v. 13, no. 2, pp. 305-318Correct modeling of complex dynamics of urban transportation flows requires the collection of large volumes of empirical data to specify types of the modes and their identification. At the same time, setting a large number of observation posts is expensive and technically not always feasible. All this results in insufficient factographic support for the traffic control systems as well as for urban planners with the obvious consequences for the quality of their decisions. As one of the means to provide large-scale data collection at least for the qualitative situation analysis, the wide-area video cameras are used in different situation centers. There they are analyzed by human operators who are responsible for observation and control. Some video cameras provided their videos for common access, which makes them a valuable resource for transportation studies. However, there are significant problems with getting qualitative data from such cameras, which relate to the theory and practice of image processing. This study is devoted to the practical application of certain mainstream neuro-networking technologies for the estimation of essential characteristics of actual transportation flows. The problems arising in processing these data are analyzed, and their solutions are suggested. The convolution neural networks are used for tracking, and the methods for obtaining basic parameters of transportation flows from these observations are studied. The simplified neural networks are used for the preparation of training sets for the deep learning neural network YOLOv4 which is later used for the estimation of speed and density of automobile flows.
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Mathematical simulation of vortex motion in the astrophysical objects on the basis of the gas-dynamic model
Computer Research and Modeling, 2018, v. 10, no. 5, pp. 631-643Views (last year): 27.The application of a conservative numerical method of fluxes is examined for studying the vortex structures in the massive, fast-turned compact astrophysical objects, which are in self-gravity conditions. The simulation is accomplished for the objects with different mass and rotational speed. The pictures of the vortex structure of objects are visualized. In the calculations the gas-dynamic model is used, in which gas is accepted perfected and nonviscous. Numerical procedure is based on the finite-difference approximation of the conservation laws of the additive characteristics of medium for the finite volume. The “upwind” approximations of the densities of distribution of mass, components of momentum and total energy are applied. For the simulation of the objects, which possess fast-spin motion, the control of conservation for the component of moment of momentun is carried out during calculation. Evolutionary calculation is carried out on the basis of the parallel algorithms, realized on the computer complex of cluster architecture. Algorithms are based on the standardized system of message transfer Message Passing Interface (MPI). The blocking procedures of exchange and non-blocking procedures of exchange with control of the completion of operation are used. The parallelization on the space in two or three directions is carried out depending on the size of integration area and parameters of computational grid. For each subarea the parallelization based on the physical factors is carried out also: the calculations of gas dynamics part and gravitational forces are realized on the different processors, that allows to raise the efficiency of algorithms. The real possibility of the direct calculation of gravitational forces by means of the summation of interaction between all finite volumes in the integration area is shown. For the finite volume methods this approach seems to more consecutive than the solution of Poisson’s equation for the gravitational potential. Numerical calculations were carried out on the computer complex of cluster architecture with the peak productivity 523 TFlops. In the calculations up to thousand processors was used.
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Numerical modeling and parallel computations of heat and mass transfer during physical and chemical actions on the non-uniform oil reservoir developing by system of wells
Computer Research and Modeling, 2020, v. 12, no. 2, pp. 319-328The paper provides the mathematical and numerical models of the interrelated thermo- and hydrodynamic processes in the operational mode of development the unified oil-producing complex during the hydrogel flooding of the non-uniform oil reservoir exploited with a system of arbitrarily located injecting wells and producing wells equipped with submersible multistage electrical centrifugal pumps. A special feature of our approach is the modeling of the special ground-based equipment operation (control stations of submersible pumps, drossel devices on the head of producing wells), designed to regulate the operation modes of both the whole complex and its individual elements.
The complete differential model includes equations governing non-stationary two-phase five-component filtration in the reservoir, quasi-stationary heat and mass transfer in the wells and working channels of pumps. Special non-linear boundary conditions and dependencies simulate, respectively, the influence of the drossel diameter on the flow rate and pressure at the wellhead of each producing well and the frequency electric current on the performance characteristics of the submersible pump unit. Oil field development is also regulated by the change in bottom-hole pressure of each injection well, concentration of the gel-forming components pumping into the reservoir, their total volume and duration of injection. The problem is solved numerically using conservative difference schemes constructed on the base of the finite difference method, and developed iterative algorithms oriented on the parallel computing technologies. Numerical model is implemented in a software package which can be considered as the «Intellectual System of Wells» for the virtual control the oil field development.
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Numerical simulation of flow in a two-dimensional flat diffuser based on two fluid turbulence models
Computer Research and Modeling, 2021, v. 13, no. 6, pp. 1149-1160The article presents the results of a numerical study of the flow structure in a two-dimensional flat diffuser. A feature of diffusers is that they have a complex anisotropic turbulent flow, which occurs due to recirculation flows. The turbulent RANS models, which are based on the Boussinesq hypothesis, are not able to describe the flow in diffusers with sufficient accuracy. Because the Boussinesq hypothesis is based on isotropic turbulence. Therefore, to calculate anisotropic turbulent flows, models are used that do not use this hypothesis. One of such directions in turbulence modeling is the methods of Reynolds stresses. These methods are complex and require rather large computational resources. In this work, a relatively recently developed two-fluid turbulence model was used to study the flow in a flat diffuser. This model is developed on the basis of a two-fluid approach to the problem of turbulence. In contrast to the Reynolds approach, the two-fluid approach allows one to obtain a closed system of turbulence equations using the dynamics of two fluids. Consequently, if empirical equations are used in RANS models for closure, then in the two-fluid model the equations used are exact equations of dynamics. One of the main advantages of the two-fluid model is that it is capable of describing complex anisotropic turbulent flows. In this work, the obtained numerical results for the profiles of the longitudinal velocity, turbulent stresses in various sections of the channel, as well as the friction coefficient are compared with the known experimental data. To demonstrate the advantages of the used turbulence model, the numerical results of the Reynolds stress method EARSM are also presented. For the numerical implementation of the systems of equations of the two-fluid model, a non-stationary system of equations was used, the solution of which asymptotically approached the stationary solution. For this purpose, a finite-difference scheme was used, where the viscosity terms were approximated by the central difference implicitly, and for the convective terms, an explicit scheme against the flow of the second order of accuracy was used. The results are obtained for the Reynolds number Re = 20 000. It is shown that the two-fluid model, despite the use of a uniform computational grid without thickening near the walls, is capable of giving a more accurate solution than the rather complex Reynolds stress method with a high resolution of computational grids.
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Optimization of a hull form for decrease ship resistance to movement
Computer Research and Modeling, 2017, v. 9, no. 1, pp. 57-65Views (last year): 10. Citations: 1 (RSCI).Optimization of hull lines for the minimum resistance to movement is a problem of current interest in ship hydrodynamics. In practice, lines design is still to some extent an art. The usual approaches to decrease the ship resistance are based on the model experiment and/or CFD simulation, following the trial and error method. The paper presents a new method of in-detail hull form design based on the wave-based optimization approach. The method provides systematic variation of the hull geometrical form, which corresponds to alteration of longitudinal distribution of the hull volume, while its vertical volume distribution is fixed or highly controlled. It’s well known from the theoretical studies that the vertical distribution can't be optimized by condition of minimum wave resistance, thus it can be neglected for the optimization procedures. The method efficiency was investigated by application to the foreship of KCS, the well-known test object from the workshop Gothenburg-2000. The variations of the longitudinal distribution of the volume were set on the sectional area curve as finite volume increments and then transferred to the lines plan with the help of special frame transformation methods. The CFD towing simulations were carried out for the initial hull form and the six modified variants. According to the simulation results, examined modifications caused the resistance increments in the range 1.3–6.5 %. Optimization process was underpinned with the respective data analysis based on the new hypothesis, according to which, the resistance increments caused by separate longitudinal segments of hull form meet the principle of superposition. The achieved results, which are presented as the optimum distribution of volume present in the optimized designed hull form, which shows the interesting characteristics that its resistance has decrease by 8.9 % in respect to initial KCS hull form. Visualization of the wave patterns showed an attenuation of the transversal wave components, and the intensification of the diverging wave components.
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Simulation of uneven combustion and stress-strain state of powder elements of a tubular charge during firing
Computer Research and Modeling, 2022, v. 14, no. 6, pp. 1281-1300The paper presents the physical and mathematical formulation of the problems of internal ballistics of an artillery shot for a charge consisting of a set of powder tubes and their stress-strain state. Combustion and movement of a bundle of powder tubes along the barrel channel is modeled by an equivalent tubular charge of all-round combustion. It is assumed that the equivalent tube moves along the axis of the bore. The speed of movement of an equivalent tubular charge and its current position are determined from Newton’s second law. When calculating the flow parameters, two-dimensional axisymmetric equations of gas dynamics were used, for the solution of which an axisymmetric orthogonalized difference grid is constructed, which adapts to the flow conditions. The control volume method is used to numerically solve the system of gas-dynamic equations. The gas parameters at the boundaries of the control volumes are determined using a self-similar solution to the Godunov’s problem of the decay of an arbitrary discontinuity. The stress-strain state is modeled for a separate burning powder tube located in the field of gas-dynamic parameters. The calculation of the gas-dynamic parameters of the shot is carried out without taking into account the deformed state of the powder elements. The behavior of powder elements during firing is considered under these conditions. The finite element method with the division of the calculation area into triangular elements is used to solve the problem of elasticity. In the process of powder tube burnout, the computational grid on each time layer of the dynamic problem is completely updated due to a change in the boundaries of the powder element due to combustion. The paper shows the time dependences of the parameters of the internal ballistics process and the stress-strain state of powder elements, as well as the distribution of the main parameters of the flow of combustion products at different points in time. It has been established that the tubular powder elements during the shot experience significant deformations, which must be taken into account when solving the basic problem of internal ballistics. The data obtained give an idea of the level of equivalent stresses acting at various points of the powder element. The results obtained indicate the relevance of the conjugate formulation of the problem of gas dynamics and the stress-strain state for charges consisting of tubular powders, since this allows a new approach to the design of tubular charges and opens up the possibility of determining the parameters on which the physics of the combustion process of gunpowder significantly depends, therefore, and the dynamics of the shot process.
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Analysis of point model of fibrin polymerization
Computer Research and Modeling, 2017, v. 9, no. 2, pp. 247-258Views (last year): 8.Functional modeling of blood clotting and fibrin-polymer mesh formation is of a significant value for medical and biophysics applications. Despite the fact of some discrepancies present in simplified functional models their results are of the great interest for the experimental science as a handy tool of the analysis for research planning, data processing and verification. Under conditions of the good correspondence to the experiment functional models can be used as an element of the medical treatment methods and biophysical technologies. The aim of the paper in hand is a modeling of a point system of the fibrin-polymer formation as a multistage polymerization process with a sol-gel transition at the final stage. Complex-value Rosenbroke method of second order (CROS) used for computational experiments. The results of computational experiments are presented and discussed. It was shown that in the physiological range of the model coefficients there is a lag period of approximately 20 seconds between initiation of the reaction and fibrin gel appearance which fits well experimental observations of fibrin polymerization dynamics. The possibility of a number of the consequent $(n = 1–3)$ sol-gel transitions demonstrated as well. Such a specific behavior is a consequence of multistage nature of fibrin polymerization process. At the final stage the solution of fibrin oligomers of length 10 can reach a semidilute state, leading to an extremely fast gel formation controlled by oligomers’ rotational diffusion. Otherwise, if the semidilute state is not reached the gel formation is controlled by significantly slower process of translational diffusion. Such a duality in the sol-gel transition led authors to necessity of introduction of a switch-function in an equation for fibrin-polymer formation kinetics. Consequent polymerization events can correspond to experimental systems where fibrin mesh formed gets withdrawn from the volume by some physical process like precipitation. The sensitivity analysis of presented system shows that dependence on the first stage polymerization reaction constant is non-trivial.
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Effect of buoyancy force on mixed convection of a variable density fluid in a square lid-driven cavity
Computer Research and Modeling, 2020, v. 12, no. 3, pp. 575-595The paper considers the problem of stationary mixed convection and heat transfer of a viscous heatconducting fluid in a plane square lid-driven cavity. The hot top cover of the cavity has any temperature $T_\mathrm{H}$ and cold bottom wall has temperature $T_\mathrm{0} (T_\mathrm{H} > T_\mathrm{0})$, whereas in contrast the side walls are insulated. The fact that the fluid density can take arbitrary values depending on the amount of overheating of the cavity cover is a feature of the problem. The mathematical formulation includes the Navier–Stokes equations in the ’velocity–pressure’ variables and the heat balance equation which take into account the incompressibility of the fluid flow and the influence of volumetric buoyancy force. The difference approximation of the original differential equations has been performed by the control volume method. Numerical solutions of the problem have been obtained on the $501 \times 501$ grid for the following values of similarity parameters: Prandtl number Pr = 0.70; Reynolds number Re = 100 and 1000; Richardson number Ri = 0.1, 1, and 10; and the relative cover overheating $(T_\mathrm{H}-T_\mathrm{0})/T_\mathrm{0} = 0, 1, 2, 3$. Detailed flow patterns in the form of streamlines and isotherms of relative overheating of the fluid flow are given in the work. It is shown that the increase in the value of the Richardson number (the increase in the influence of buoyancy force) leads to a fundamental change in the structure of the liquid stream. It is also found out that taking into account the variability of the liquid density leads to weakening of the influence of Ri growth on the transformation of the flow structure. The change in density in a closed volume is the cause of this weakening, since it always leads to the existence of zones with negative buoyancy in the presence of a volumetric force. As a consequence, the competition of positive and negative volumetric forces leads in general to weakening of the buoyancy effect. The behaviors of heat exchange coefficient (Nusselt number) and coefficient of friction along the bottom wall of the cavity depending on the parameters of the problem are also analyzed. It is revealed that the greater the values of the Richardson number are, the greater, ceteris paribus, the influence of density variation on these coefficients is.
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