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Synthesis of the structure of organised systems as central problem of evolutionary cybernetics
Computer Research and Modeling, 2023, v. 15, no. 5, pp. 1103-1124The article provides approaches to evolutionary modelling of synthesis of organised systems and analyses methodological problems of evolutionary computations of this kind. Based on the analysis of works on evolutionary cybernetics, evolutionary theory, systems theory and synergetics, we conclude that there are open problems in formalising the synthesis of organised systems and modelling their evolution. The article emphasises that the theoretical basis for the practice of evolutionary modelling is the principles of the modern synthetic theory of evolution. Our software project uses a virtual computing environment for machine synthesis of problem solving algorithms. In the process of modelling, we obtained the results on the basis of which we conclude that there are a number of conditions that fundamentally limit the applicability of genetic programming methods in the tasks of synthesis of functional structures. The main limitations are the need for the fitness function to track the step-by-step approach to the solution of the problem and the inapplicability of this approach to the problems of synthesis of hierarchically organised systems. We note that the results obtained in the practice of evolutionary modelling in general for the whole time of its existence, confirm the conclusion the possibilities of genetic programming are fundamentally limited in solving problems of synthesizing the structure of organized systems. As sources of fundamental difficulties for machine synthesis of system structures the article points out the absence of directions for gradient descent in structural synthesis and the absence of regularity of random appearance of new organised structures. The considered problems are relevant for the theory of biological evolution. The article substantiates the statement about the biological specificity of practically possible ways of synthesis of the structure of organised systems. As a theoretical interpretation of the discussed problem, we propose to consider the system-evolutionary concept of P.K.Anokhin. The process of synthesis of functional structures in this context is an adaptive response of organisms to external conditions based on their ability to integrative synthesis of memory, needs and information about current conditions. The results of actual studies are in favour of this interpretation. We note that the physical basis of biological integrativity may be related to the phenomena of non-locality and non-separability characteristic of quantum systems. The problems considered in this paper are closely related to the problem of creating strong artificial intelligence.
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Equilibrium states of the second kind of the Kuramoto – Sivashinsky equation with the homogeneous Neumann boundary conditions
Computer Research and Modeling, 2019, v. 11, no. 1, pp. 59-69Views (last year): 27.The well-known evolutionary equation of mathematical physics, which in modern mathematical literature is called the Kuramoto – Sivashinsky equation, is considered. In this paper, this equation is studied in the original edition of the authors, where it was proposed, together with the homogeneous Neumann boundary conditions.
The question of the existence and stability of local attractors formed by spatially inhomogeneous solutions of the boundary value problem under study has been studied. This issue has become particularly relevant recently in connection with the simulation of the formation of nanostructures on the surface of semiconductors under the influence of an ion flux or laser radiation. The question of the existence and stability of second-order equilibrium states has been studied in two different ways. In the first of these, the Galerkin method was used. The second approach is based on using strictly grounded methods of the theory of dynamic systems with infinite-dimensional phase space: the method of integral manifolds, the theory of normal forms, asymptotic methods.
In the work, in general, the approach from the well-known work of D.Armbruster, D.Guckenheimer, F.Holmes is repeated, where the approach based on the application of the Galerkin method is used. The results of this analysis are substantially supplemented and developed. Using the capabilities of modern computers has helped significantly complement the analysis of this task. In particular, to find all the solutions in the fourand five-term Galerkin approximations, which for the studied boundary-value problem should be interpreted as equilibrium states of the second kind. An analysis of their stability in the sense of A. M. Lyapunov’s definition is also given.
In this paper, we compare the results obtained using the Galerkin method with the results of a bifurcation analysis of a boundary value problem based on the use of qualitative analysis methods for infinite-dimensional dynamic systems. Comparison of two variants of results showed some limited possibilities of using the Galerkin method.
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Bicompact schemes for gas dynamics problems: introducing complex domains using the free boundary method
Computer Research and Modeling, 2020, v. 12, no. 3, pp. 487-504This work is dedicated to application of bicompact schemes to numerical solution of evolutionary hyperbolic equations. The main advantage of this class of schemes lies in combination of two beneficial properties: the first one is spatial approximation of high even order on a stencil that always occupies only one mesh cell; the second one is spectral resolution which is better in comparison to classic compact finite-difference schemes of the same order of spatial approximation. One feature of bicompact schemes is considered: their spatial approximation is rigidly tied to Cartesian meshes (with parallelepiped-shaped cells in three-dimensional case). This feature makes rather challenging any application of bicompact schemes to problems with complex computational domains as treated in the framework of unstructured meshes. This problem is proposed to be solved using well-known methods for treating complex-shaped boundaries and their corresponding boundary conditions on Cartesian meshes. The generalization of bicompact schemes on problems in geometrically complex domains is made in case of gas dynamics problems and Euler equations. The free boundary method is chosen as a particular tool to introduce the influence of arbitrary-shaped solid boundaries on gas flows on Cartesian meshes. A brief description of this method is given, its governing equations are written down. Bicompact schemes of fourth order of approximation in space with locally one-dimensional splitting are constructed for equations of the free boundary method. Its compensation flux is discretized with second order of accuracy. Time stepping in the obtained schemes is done with the implicit Euler method and the third order accurate $L$-stable stiffly accurate three-stage singly diagonally implicit Runge–Kutta method. The designed bicompact schemes are tested on three two-dimensional problems: stationary supersonic flows with Mach number three past one circular cylinder and past three circular cylinders; the non-stationary interaction of planar shock wave with a circular cylinder in a channel with planar parallel walls. The obtained results are in a good agreement with other works: influence of solid bodies on gas flows is physically correct, pressure in control points on solid surfaces is calculated with the accuracy appropriate to the chosen mesh resolution and level of numerical dissipation.
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Comparison of the results of using various evolution algorithms to solve the problem of route optimization of unmanned vehicles
Computer Research and Modeling, 2022, v. 14, no. 1, pp. 45-62In this paper, a comparative analysis of the exact and heuristic algorithms presented by the method of branches and boundaries, genetic and ant algorithms, respectively, is carried out to find the optimal solution to the traveling salesman problem using the example of a courier robot. The purpose of the work is to determine the running time, the length of the obtained route and the amount of memory required for the program to work, using the method of branches and boundaries and evolutionary heuristic algorithms. Also, the most appropriate of the listed methods for use in the specified conditions is determined. This article uses the materials of the conducted research, implemented in the format of a computer program, the program code for which is implemented in Python. In the course of the study, a number of criteria for the applicability of algorithms were selected (the time of the program, the length of the constructed route and the amount of memory necessary for the program to work), the results of the algorithms were obtained under specified conditions and conclusions were drawn about the degree of expediency of using one or another algorithm in various specified conditions of the courier robot. During the study, it turned out that for a small number of points $\leqslant10$, the method of branches and boundaries is the most preferable, since it finds the optimal solution faster. However, when calculating the route by this method, provided that the points increase by more than 10, the operating time increases exponentially. In this case, more effective results are obtained by a heuristic approach using a genetic and ant algorithm. At the same time, the ant algorithm is distinguished by solutions that are closest to the reference ones and with an increase of more than 16 points. Its relative disadvantage is the greatest resource intensity among the considered algorithms. The genetic algorithm gives similar results, but after increasing the points more than 16, the length of the found route increases relative to the reference one. The advantage of the genetic algorithm is its lower resource intensity compared to other algorithms.
The practical significance of this article lies in the potential possibility of using the results obtained for the optimal solution of logistics problems by an automated system in various fields: warehouse logistics, transport logistics, «last mile» logistics, etc.
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Mathematical simulation of vortex motion in the astrophysical objects on the basis of the gas-dynamic model
Computer Research and Modeling, 2018, v. 10, no. 5, pp. 631-643Views (last year): 27.The application of a conservative numerical method of fluxes is examined for studying the vortex structures in the massive, fast-turned compact astrophysical objects, which are in self-gravity conditions. The simulation is accomplished for the objects with different mass and rotational speed. The pictures of the vortex structure of objects are visualized. In the calculations the gas-dynamic model is used, in which gas is accepted perfected and nonviscous. Numerical procedure is based on the finite-difference approximation of the conservation laws of the additive characteristics of medium for the finite volume. The “upwind” approximations of the densities of distribution of mass, components of momentum and total energy are applied. For the simulation of the objects, which possess fast-spin motion, the control of conservation for the component of moment of momentun is carried out during calculation. Evolutionary calculation is carried out on the basis of the parallel algorithms, realized on the computer complex of cluster architecture. Algorithms are based on the standardized system of message transfer Message Passing Interface (MPI). The blocking procedures of exchange and non-blocking procedures of exchange with control of the completion of operation are used. The parallelization on the space in two or three directions is carried out depending on the size of integration area and parameters of computational grid. For each subarea the parallelization based on the physical factors is carried out also: the calculations of gas dynamics part and gravitational forces are realized on the different processors, that allows to raise the efficiency of algorithms. The real possibility of the direct calculation of gravitational forces by means of the summation of interaction between all finite volumes in the integration area is shown. For the finite volume methods this approach seems to more consecutive than the solution of Poisson’s equation for the gravitational potential. Numerical calculations were carried out on the computer complex of cluster architecture with the peak productivity 523 TFlops. In the calculations up to thousand processors was used.
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Layered Bénard–Marangoni convection during heat transfer according to the Newton’s law of cooling
Computer Research and Modeling, 2016, v. 8, no. 6, pp. 927-940Views (last year): 10. Citations: 3 (RSCI).The paper considers mathematical modeling of layered Benard–Marangoni convection of a viscous incompressible fluid. The fluid moves in an infinitely extended layer. The Oberbeck–Boussinesq system describing layered Benard–Marangoni convection is overdetermined, since the vertical velocity is zero identically. We have a system of five equations to calculate two components of the velocity vector, temperature and pressure (three equations of impulse conservation, the incompressibility equation and the heat equation). A class of exact solutions is proposed for the solvability of the Oberbeck–Boussinesq system. The structure of the proposed solution is such that the incompressibility equation is satisfied identically. Thus, it is possible to eliminate the «extra» equation. The emphasis is on the study of heat exchange on the free layer boundary, which is considered rigid. In the description of thermocapillary convective motion, heat exchange is set according to the Newton’s law of cooling. The application of this heat distribution law leads to the third-kind initial-boundary value problem. It is shown that within the presented class of exact solutions to the Oberbeck–Boussinesq equations the overdetermined initial-boundary value problem is reduced to the Sturm–Liouville problem. Consequently, the hydrodynamic fields are expressed using trigonometric functions (the Fourier basis). A transcendental equation is obtained to determine the eigenvalues of the problem. This equation is solved numerically. The numerical analysis of the solutions of the system of evolutionary and gradient equations describing fluid flow is executed. Hydrodynamic fields are analyzed by a computational experiment. The existence of counterflows in the fluid layer is shown in the study of the boundary value problem. The existence of counterflows is equivalent to the presence of stagnation points in the fluid, and this testifies to the existence of a local extremum of the kinetic energy of the fluid. It has been established that each velocity component cannot have more than one zero value. Thus, the fluid flow is separated into two zones. The tangential stresses have different signs in these zones. Moreover, there is a fluid layer thickness at which the tangential stresses at the liquid layer equal to zero on the lower boundary. This physical effect is possible only for Newtonian fluids. The temperature and pressure fields have the same properties as velocities. All the nonstationary solutions approach the steady state in this case.
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Optimal fishing and evolution of fish migration routes
Computer Research and Modeling, 2019, v. 11, no. 5, pp. 879-893A new discrete ecological-evolutionary mathematical model is presented, in which the search mechanisms for evolutionarily stable migration routes of fish populations are implemented. The proposed adaptive designs have a small dimension, and therefore have high speed. This allows carrying out calculations on long-term perspective for an acceptable machine time. Both geometric approaches of nonlinear analysis and computer “asymptotic” methods were used in the study of stability. The migration dynamics of the fish population is described by a certain Markov matrix, which can change during evolution. The “basis” matrices are selected in the family of Markov matrices (of fixed dimension), which are used to generate migration routes of mutant. A promising direction of the evolution of the spatial behavior of fish is revealed for a given fishery and food supply, as a result of competition of the initial population with mutants. This model was applied to solve the problem of optimal catch for the long term, provided that the reservoir is divided into two parts, each of which has its own owner. Dynamic programming is used, based on the construction of the Bellman function, when solving optimization problems. A paradoxical strategy of “luring” was discovered, when one of the participants in the fishery temporarily reduces the catch in its water area. In this case, the migrating fish spends more time in this area (on condition of equal food supply). This route is evolutionarily fixes and does not change even after the resumption of fishing in the area. The second participant in the fishery can restore the status quo by applying “luring” to its part of the water area. Endless sequence of “luring” arises as a kind of game “giveaway”. A new effective concept has been introduced — the internal price of the fish population, depending on the zone of the reservoir. In fact, these prices are Bellman's private derivatives, and can be used as a tax on caught fish. In this case, the problem of long-term fishing is reduced to solving the problem of one-year optimization.
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On possible changes in phytocenoses of the Sea of Azov under climate warming
Computer Research and Modeling, 2017, v. 9, no. 6, pp. 981-991Views (last year): 11.Base long-term modern scenarios of hydrochemical and temperature regimes of the Sea of Azov were considered. New schemes of modeling mechanisms of algal adaptation to changes in the hydrochemical regime and temperature were proposed. In comparison to the traditional ecological-evolutionary schemes, these models have a relatively small dimension, high speed and allow carrying out various calculations on long-term perspective (evolutionally significant times). Based on the ecology-evolutionary model of the lower trophic levels the impact of these environmental factors on the dynamics and microevolution of algae in the Sea of Azov was estimated. In each scenario, the calculations were made for 100 years, with the final values of the variables and parameters not depending on the choice of the initial values. In the process of such asymptotic computer analysis, it was found that as a result of climate warming and temperature adaptation of organisms, the average annual biomass of thermophilic algae (Pyrrophyta and Cyanophyta) naturally increases. However, for a number of diatom algae (Bacillariophyta), even with their temperature adaptation, the average annual biomass may unexpectedly decrease. Probably, this phenomenon is associated with a toughening of competition between species with close temperature parameters of existence. The influence of the variation in the chemical composition of the Don River’s flow on the dynamics of nutrients and algae of the Sea of Azov was also investigated. It turned out that the ratio of organic forms of nitrogen and phosphorus in sea waters varies little. This stabilization phenomenon will take place for all high-productive reservoirs with low flow, due to autochthonous origin of larger part of organic matter in water bodies of this type.
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Utilizing multi-source real data for traffic flow optimization in CTraf
Computer Research and Modeling, 2024, v. 16, no. 1, pp. 147-159The problem of optimal control of traffic flow in an urban road network is considered. The control is carried out by varying the duration of the working phases of traffic lights at controlled intersections. A description of the control system developed is given. The control system enables the use of three types of control: open-loop, feedback and manual. In feedback control, road infrastructure detectors, video cameras, inductive loop and radar detectors are used to determine the quantitative characteristics of current traffic flow state. The quantitative characteristics of the traffic flows are fed into a mathematical model of the traffic flow, implemented in the computer environment of an automatic traffic flow control system, in order to determine the moments for switching the working phases of the traffic lights. The model is a system of finite-difference recurrent equations and describes the change in traffic flow on each road section at each time step, based on retrived data on traffic flow characteristics in the network, capacity of maneuvers and flow distribution through alternative maneuvers at intersections. The model has scaling and aggregation properties. The structure of the model depends on the structure of the graph of the controlled road network. The number of nodes in the graph is equal to the number of road sections in the considered network. The simulation of traffic flow changes in real time makes it possible to optimally determine the duration of traffic light operating phases and to provide traffic flow control with feedback based on its current state. The system of automatic collection and processing of input data for the model is presented. In order to model the states of traffic flow in the network and to solve the problem of optimal traffic flow control, the CTraf software package has been developed, a brief description of which is given in the paper. An example of the solution of the optimal control problem of traffic flows on the basis of real data in the road network of Moscow is given.
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Interval analysis of vegetation cover dynamics
Computer Research and Modeling, 2020, v. 12, no. 5, pp. 1191-1205In the development of the previously obtained result on modeling the dynamics of vegetation cover, due to variations in the temperature background, a new scheme for the interval analysis of the dynamics of floristic images of formations is presented in the case when the parameter of the response rate of the model of the dynamics of each counting plant species is set by the interval of scatter of its possible values. The detailed description of the functional parameters of macromodels of biodiversity, desired in fundamental research, taking into account the essential reasons for the observed evolutionary processes, may turn out to be a problematic task. The use of more reliable interval estimates of the variability of functional parameters “bypasses” the problem of uncertainty in the primary assessment of the evolution of the phyto-resource potential of the developed controlled territories. The solutions obtained preserve not only a qualitative picture of the dynamics of species diversity, but also give a rigorous, within the framework of the initial assumptions, a quantitative assessment of the degree of presence of each plant species. The practical significance of two-sided estimation schemes based on the construction of equations for the upper and lower boundaries of the trajectories of the scatter of solutions depends on the conditions and measure of proportional correspondence of the intervals of scatter of the initial parameters with the intervals of scatter of solutions. For dynamic systems, the desired proportionality is not always ensured. The given examples demonstrate the acceptable accuracy of interval estimation of evolutionary processes. It is important to note that the constructions of the estimating equations generate vanishing intervals of scatter of solutions for quasi-constant temperature perturbations of the system. In other words, the trajectories of stationary temperature states of the vegetation cover are not roughened by the proposed interval estimation scheme. The rigor of the result of interval estimation of the species composition of the vegetation cover of formations can become a determining factor when choosing a method in the problems of analyzing the dynamics of species diversity and the plant potential of territorial systems of resource-ecological monitoring. The possibilities of the proposed approach are illustrated by geoinformation images of the computational analysis of the dynamics of the vegetation cover of the Yamal Peninsula and by the graphs of the retro-perspective analysis of the floristic variability of the formations of the landscapelithological group “Upper” based on the data of the summer temperature background of the Salehard weather station from 2010 to 1935. The developed indicators of floristic variability and the given graphs characterize the dynamics of species diversity, both on average and individually in the form of intervals of possible states for each species of plant.
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