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Numerical simulation of sportsman's external flow
Computer Research and Modeling, 2017, v. 9, no. 2, pp. 331-344Views (last year): 29.Numerical simulation of moving sportsman external flow is presented. The unique method is developed for obtaining integral aerodynamic characteristics, which were the function of the flow regime (i.e. angle of attack, flow speed) and body position. Individual anthropometric characteristics and moving boundaries of sportsman (or sports equipment) during the race are taken into consideration.
Numerical simulation is realized using FlowVision CFD. The software is based on the finite volume method, high-performance numerical methods and reliable mathematical models of physical processes. A Cartesian computational grid is used by FlowVision, the grid generation is a completely automated process. Local grid adaptation is used for solving high-pressure gradient and object complex shape. Flow simulation process performed by solutions systems of equations describing movement of fluid and/or gas in the computational domain, including: mass, moment and energy conservation equations; state equations; turbulence model equations. FlowVision permits flow simulation near moving bodies by means of computational domain transformation according to the athlete shape changes in the motion. Ski jumper aerodynamic characteristics are studied during all phases: take-off performance in motion, in-run and flight. Projected investigation defined simulation method, which includes: inverted statement of sportsman external flow development (velocity of the motion is equal to air flow velocity, object is immobile); changes boundary of the body technology defining; multiple calculations with the national team member data projecting. The research results are identification of the main factors affected to jumping performance: aerodynamic forces, rotating moments etc. Developed method was tested with active sportsmen. Ski jumpers used this method during preparations for Sochi Olympic Games 2014. A comparison of the predicted characteristics and experimental data shows a good agreement. Method versatility is underlined by performing swimmer and skater flow simulation. Designed technology is applicable for sorts of natural and technical objects.
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Modeling consensus building in conditions of dominance in a social group
Computer Research and Modeling, 2021, v. 13, no. 5, pp. 1067-1078In many social groups, for example, in technical committees for standardization, at the international, regional and national levels, in European communities, managers of ecovillages, social movements (occupy), international organizations, decision-making is based on the consensus of the group members. Instead of voting, where the majority wins over the minority, consensus allows for a solution that each member of the group supports, or at least considers acceptable. This approach ensures that all group members’ opinions, ideas and needs are taken into account. At the same time, it is noted that reaching consensus takes a long time, since it is necessary to ensure agreement within the group, regardless of its size. It was shown that in some situations the number of iterations (agreements, negotiations) is very significant. Moreover, in the decision-making process, there is always a risk of blocking the decision by the minority in the group, which not only delays the decisionmaking time, but makes it impossible. Typically, such a minority is one or two odious people in the group. At the same time, such a member of the group tries to dominate in the discussion, always remaining in his opinion, ignoring the position of other colleagues. This leads to a delay in the decision-making process, on the one hand, and a deterioration in the quality of consensus, on the other, since only the opinion of the dominant member of the group has to be taken into account. To overcome the crisis in this situation, it was proposed to make a decision on the principle of «consensus minus one» or «consensus minus two», that is, do not take into account the opinion of one or two odious members of the group.
The article, based on modeling consensus using the model of regular Markov chains, examines the question of how much the decision-making time according to the «consensus minus one» rule is reduced, when the position of the dominant member of the group is not taken into account.
The general conclusion that follows from the simulation results is that the rule of thumb for making decisions on the principle of «consensus minus one» has a corresponding mathematical justification. The simulation results showed that the application of the «consensus minus one» rule can reduce the time to reach consensus in the group by 76–95%, which is important for practice.
The average number of agreements hyperbolically depends on the average authoritarianism of the group members (excluding the authoritarian one), which means the possibility of delaying the agreement process at high values of the authoritarianism of the group members.
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Development of and research on machine learning algorithms for solving the classification problem in Twitter publications
Computer Research and Modeling, 2023, v. 15, no. 1, pp. 185-195Posts on social networks can both predict the movement of the financial market, and in some cases even determine its direction. The analysis of posts on Twitter contributes to the prediction of cryptocurrency prices. The specificity of the community is represented in a special vocabulary. Thus, slang expressions and abbreviations are used in posts, the presence of which makes it difficult to vectorize text data, as a result of which preprocessing methods such as Stanza lemmatization and the use of regular expressions are considered. This paper describes created simplest machine learning models, which may work despite such problems as lack of data and short prediction timeframe. A word is considered as an element of a binary vector of a data unit in the course of the problem of binary classification solving. Basic words are determined according to the frequency analysis of mentions of a word. The markup is based on Binance candlesticks with variable parameters for a more accurate description of the trend of price changes. The paper introduces metrics that reflect the distribution of words depending on their belonging to a positive or negative classes. To solve the classification problem, we used a dense model with parameters selected by Keras Tuner, logistic regression, a random forest classifier, a naive Bayesian classifier capable of working with a small sample, which is very important for our task, and the k-nearest neighbors method. The constructed models were compared based on the accuracy metric of the predicted labels. During the investigation we recognized that the best approach is to use models which predict price movements of a single coin. Our model deals with posts that mention LUNA project, which no longer exist. This approach to solving binary classification of text data is widely used to predict the price of an asset, the trend of its movement, which is often used in automated trading.
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Pattern formation of a three-species predator – prey model with prey-taxis and omnivorous predator
Computer Research and Modeling, 2023, v. 15, no. 6, pp. 1617-1634The spatiotemporal dynamics of a three-component model for food web is considered. The model describes the interactions among resource, prey and predator that consumes both species. In a previous work, the author analyzed the model without taking into account spatial heterogeneity. This study continues the model study of the community considering the diffusion of individuals, as well as directed movements of the predator. It is assumed that the predator responds to the spatial change in the resource and prey density by occupying areas where species density is higher or avoiding them. Directed predator movement is described by the advection term, where velocity is proportional to the gradient of resource and prey density. The system is considered on a one-dimensional domain with zero-flux conditions as boundary ones. The spatiotemporal dynamics produced by model is determined by the system stability in the vicinity of stationary homogeneous state with respect to small inhomogeneous perturbations. The paper analyzes the possibility of wave instability leading to the emergence of autowaves and Turing instability, as a result of which stationary patterns are formed. Sufficient conditions for the existence of both types of instability are obtained. The influence of local kinetic parameters on the spatial structure formation was analyzed. It was shown that only Turing instability is possible when taxis on the resource is positive, but with a negative taxis, both types of instability are possible. The numerical solution of the system was found by using method of lines (MOL) with the numerical integration of ODE system by means of splitting techniques. The spatiotemporal dynamics of the system is presented in several variants, realizing one of the instability types. In the case of a positive taxis on the prey, both autowave and stationary structures are formed in smaller regions, with an increase in the region size, Turing structures are not formed. For negative taxis on the prey, stationary patterns is observed in both regions, while periodic structures appear only in larger areas.
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Predictive models of efficacy and public health impact of vaccination with rotavirus vaccine in Ukraine
Computer Research and Modeling, 2012, v. 4, no. 2, pp. 407-421Views (last year): 2.There were presented the results of the computational and theoretical studies related to assessing of an efficacy and public health impact of a vaccination with a rotavirus vaccine in Ukraine. The required indicators are: the genotype-specific vaccine efficacy, number of the severe illness preventions, hospitalizations, outpatient visits and deaths. The results were obtained in a form of tree of decisions based on Makrov model by using mathematical model with computer simulation. The results showed the significant positive effect of the vaccination compared to no vaccination, in case of high level of vaccine coverage in Ukraine.
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Calculation of transverse wave speed in preloaded fibres under an impact
Computer Research and Modeling, 2022, v. 14, no. 4, pp. 887-897The paper considers the problem of transverse impact on a thin preloaded fiber. The commonly accepted theory of transverse impact on a thin fiber is based on the classical works of Rakhmatulin and Smith. The simple relations obtained from the Rakhmatulin – Smith theory are widely used in engineering practice. However, there are numerous evidences that experimental results may differ significantly from estimations based on these relations. A brief overview of the factors that cause the differences is given in this article.
This paper focuses on the shear wave velocity, as it is the only feature that can be directly observed and measured using high-speed cameras or similar methods. The influence of the fiber preload on the wave speed is considered. This factor is important, since it inevitably arises in the experimental results. The reliable fastening and precise positioning of the fiber during the experiments requires its preload. This work shows that the preload significantly affects the shear wave velocity in the impacted fiber.
Numerical calculations were performed for Kevlar 29 and Spectra 1000 yarns. Shear wave velocities are obtained for different levels of initial tension. A direct comparison of numerical results and analytical estimations with experimental data is presented. The speed of the transverse wave in free and preloaded fibers differed by a factor of two for the setup parameters considered. This fact demonstrates that measurements based on high-speed imaging and analysis of the observed shear waves should take into account the preload of the fibers.
This paper proposes a formula for a quick estimation of the shear wave velocity in preloaded fibers. The formula is obtained from the basic relations of the Rakhmatulin – Smith theory under the assumption of a large initial deformation of the fiber. The formula can give significantly better results than the classical approximation, this fact is demonstrated using the data for preloaded Kevlar 29 and Spectra 1000. The paper also shows that direct numerical calculation has better corresponding with the experimental data than any of the considered analytical estimations.
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Analysis of Brownian and molecular dynamics trajectories of to reveal the mechanisms of protein-protein interactions
Computer Research and Modeling, 2023, v. 15, no. 3, pp. 723-738The paper proposes a set of fairly simple analysis algorithms that can be used to analyze a wide range of protein-protein interactions. In this work, we jointly use the methods of Brownian and molecular dynamics to describe the process of formation of a complex of plastocyanin and cytochrome f proteins in higher plants. In the diffusion-collision complex, two clusters of structures were revealed, the transition between which is possible with the preservation of the position of the center of mass of the molecules and is accompanied only by a rotation of plastocyanin by 134 degrees. The first and second clusters of structures of collisional complexes differ in that in the first cluster with a positively charged region near the small domain of cytochrome f, only the “lower” plastocyanin region contacts, while in the second cluster, both negatively charged regions. The “upper” negatively charged region of plastocyanin in the first cluster is in contact with the amino acid residue of lysine K122. When the final complex is formed, the plastocyanin molecule rotates by 69 degrees around an axis passing through both areas of electrostatic contact. With this rotation, water is displaced from the regions located near the cofactors of the molecules and formed by hydrophobic amino acid residues. This leads to the appearance of hydrophobic contacts, a decrease in the distance between the cofactors to a distance of less than 1.5 nm, and further stabilization of the complex in a position suitable for electron transfer. Characteristics such as contact matrices, rotation axes during the transition between states, and graphs of changes in the number of contacts during the modeling process make it possible to determine the key amino acid residues involved in the formation of the complex and to reveal the physicochemical mechanisms underlying this process.
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Models for spatial selection during location-aware beamforming in ultra-dense millimeter wave radio access networks
Computer Research and Modeling, 2024, v. 16, no. 1, pp. 195-216The work solves the problem of establishing the dependence of the potential for spatial selection of useful and interfering signals according to the signal-to-interference ratio criterion on the positioning error of user equipment during beamforming by their location at a base station, equipped with an antenna array. Configurable simulation parameters include planar antenna array with a different number of antenna elements, movement trajectory, as well as the accuracy of user equipment location estimation using root mean square error of coordinate estimates. The model implements three algorithms for controlling the shape of the antenna radiation pattern: 1) controlling the beam direction for one maximum and one zero; 2) controlling the shape and width of the main beam; 3) adaptive beamforming. The simulation results showed, that the first algorithm is most effective, when the number of antenna array elements is no more than 5 and the positioning error is no more than 7 m, and the second algorithm is appropriate to employ, when the number of antenna array elements is more than 15 and the positioning error is more than 5 m. Adaptive beamforming is implemented using a training signal and provides optimal spatial selection of useful and interfering signals without device location data, but is characterized by high complexity of hardware implementation. Scripts of the developed models are available for verification. The results obtained can be used in the development of scientifically based recommendations for beam control in ultra-dense millimeter-wave radio access networks of the fifth and subsequent generations.
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Molecular dynamics study of the effect of mutations in the tropomyosin molecule on the properties of thin filaments of the heart muscle
Computer Research and Modeling, 2024, v. 16, no. 2, pp. 513-524Muscle contraction is controlled by Ca2+ ions via regulatory proteins, troponin and tropomyosin, associated with thin actin filaments in sarcomeres. Depending on the Ca2+ concentration, the thin filament rearranges so that tropomyosin moves along its surface, opening or closing access to actin for the motor domains of myosin molecules, and causing contraction or relaxation, respectively. Numerous point amino acid substitutions in tropomyosin are known, leading to genetic pathologies — myo- and cardiomyopathies caused by changes in the structural and functional properties of the thin filament. The results of molecular dynamics modeling of a fragment of a thin filament of cardiac muscle sarcomeres formed by fibrillar actin and wildtype tropomyosin or with amino acid substitutions: the double stabilizing substitution D137L/G126R and the cardiomyopathic substitution S215L are presented. For numerical calculations, we used a new model of a thin filament fragment containing 26 actin monomers and 4 tropomyosin dimers, with a refined structure of the region of overlap of neighboring tropomyosin molecules in each of the two tropomyosin strands. The simulation results showed that tropomyosin significantly increases the bending stiffness of the thin filament, as previously found experimentally. The double stabilizing replacement D137L/G126R leads to a further increase in this rigidity, and the replacement S215L, on the contrary, leads to its decrease, which also corresponds to experimental data. At the same time, these substitutions have different effects on the angular mobility of the actin helix and only slightly modulate the angular mobility of tropomyosin cables relative to the actin helix and the population of hydrogen bonds between negatively charged tropomyosin residues and positively charged actin residues. The results of the verification of the new model demonstrate that its quality is sufficient for the numerical study of the effect of single amino acid substitutions on the structure and dynamics of thin filaments and study the effects leading to dysregulation of muscle contraction. This model can be used as a useful tool for elucidating the molecular mechanisms of some genetic diseases and assessing the pathogenicity of newly discovered genetic variants.
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Application of the Dynamic Mode Decomposition in search of unstable modes in laminar-turbulent transition problem
Computer Research and Modeling, 2023, v. 15, no. 4, pp. 1069-1090Laminar-turbulent transition is the subject of an active research related to improvement of economic efficiency of air vehicles, because in the turbulent boundary layer drag increases, which leads to higher fuel consumption. One of the directions of such research is the search for efficient methods, that can be used to find the position of the transition in space. Using this information about laminar-turbulent transition location when designing an aircraft, engineers can predict its performance and profitability at the initial stages of the project. Traditionally, $e^N$ method is applied to find the coordinates of a laminar-turbulent transition. It is a well known approach in industry. However, despite its widespread use, this method has a number of significant drawbacks, since it relies on parallel flow assumption, which limits the scenarios for its application, and also requires computationally expensive calculations in a wide range of frequencies and wave numbers. Alternatively, flow analysis can be done by using Dynamic Mode Decomposition, which allows one to analyze flow disturbances using flow data directly. Since Dynamic Mode Decomposition is a dimensionality reduction method, the number of computations can be dramatically reduced. Furthermore, usage of Dynamic Mode Decomposition expands the applicability of the whole method, due to the absence of assumptions about the parallel flow in its derivation.
The presented study proposes an approach to finding the location of a laminar-turbulent transition using the Dynamic Mode Decomposition method. The essence of this approach is to divide the boundary layer region into sets of subregions, for each of which the transition point is independently calculated, using Dynamic Mode Decomposition for flow analysis, after which the results are averaged to produce the final result. This approach is validated by laminar-turbulent transition predictions of subsonic and supersonic flows over a 2D flat plate with zero pressure gradient. The results demonstrate the fundamental applicability and high accuracy of the described method in a wide range of conditions. The study focuses on comparison with the $e^N$ method and proves the advantages of the proposed approach. It is shown that usage of Dynamic Mode Decomposition leads to significantly faster execution due to less intensive computations, while the accuracy is comparable to the such of the solution obtained with the $e^N$ method. This indicates the prospects for using the described approach in a real world applications.
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International Interdisciplinary Conference "Mathematics. Computing. Education"