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Technique for analyzing noise-induced phenomena in two-component stochastic systems of reaction – diffusion type with power nonlinearity
Computer Research and Modeling, 2025, v. 17, no. 2, pp. 277-291The paper constructs and studies a generalized model describing two-component systems of reaction – diffusion type with power nonlinearity, considering the influence of external noise. A methodology has been developed for analyzing the generalized model, which includes linear stability analysis, nonlinear stability analysis, and numerical simulation of the system’s evolution. The linear analysis technique uses basic approaches, in which the characteristic equation is obtained using a linearization matrix. Nonlinear stability analysis realized up to third-order moments inclusively. For this, the functions describing the dynamics of the components are expanded in Taylor series up to third-order terms. Then, using the Novikov theorem, the averaging procedure is carried out. As a result, the obtained equations form an infinite hierarchically subordinate structure, which must be truncated at some point. To achieve this, contributions from terms higher than the third order are neglected in both the equations themselves and during the construction of the moment equations. The resulting equations form a set of linear equations, from which the stability matrix is constructed. This matrix has a rather complex structure, making it solvable only numerically. For the numerical study of the system’s evolution, the method of variable directions was chosen. Due to the presence of a stochastic component in the analyzed system, the method was modified such that random fields with a specified distribution and correlation function, responsible for the noise contribution to the overall nonlinearity, are generated across entire layers. The developed methodology was tested on the reaction – diffusion model proposed by Barrio et al., according to the results of the study, they showed the similarity of the obtained structures with the pigmentation of fish. This paper focuses on the system behavior analysis in the neighborhood of a non-zero stationary point. The dependence of the real part of the eigenvalues on the wavenumber has been examined. In the linear analysis, a range of wavenumber values is identified in which Turing instability occurs. Nonlinear analysis and numerical simulation of the system’s evolution are conducted for model parameters that, in contrast, lie outside the Turing instability region. Nonlinear analysis found noise intensities of additive noise for which, despite the absence of conditions for the emergence of diffusion instability, the system transitions to an unstable state. The results of the numerical simulation of the evolution of the tested model demonstrate the process of forming spatial structures of Turing type under the influence of additive noise.
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Impact of spatial resolution on mobile robot path optimality in two-dimensional lattice models
Computer Research and Modeling, 2025, v. 17, no. 6, pp. 1131-1148This paper examines the impact of the spatial resolution of a discretized (lattice) representation of the environment on the efficiency and correctness of optimal pathfinding in complex environments. Scenarios are considered that may include bottlenecks, non-uniform obstacle distributions, and areas of increased safety requirements in the immediate vicinity of obstacles. Despite the widespread use of lattice representations of the environment in robotics due to their compatibility with sensor data and support for classical trajectory planning algorithms, the resolution of these lattices has a significant impact on both goal reachability and optimal path performance. An algorithm is proposed that combines environmental connectivity analysis, trajectory optimization, and geometric safety refinement. In the first stage, the Leath algorithm is used to estimate the reachability of the target point by identifying a connected component containing the starting position. Upon confirmation of the target point’s reachability, the A* algorithm is applied to the nodes of this component in the second stage to construct a path that simultaneously minimizes both the path length and the risk of collision. In the third stage, a refined obstacle distance estimate is performed for nodes located in safety zones using a combination of the Gilbert – Johnson –Keerthi (GJK) and expanding polyhedron (EPA) algorithms. Experimental analysis revealed a nonlinear relationship between the probability of the existence and effectiveness of an optimal path and the lattice parameters. Specifically, reducing the spatial resolution of the lattice increases the likelihood of connectivity loss and target unreachability, while increasing its spatial resolution increases computational complexity without a proportional improvement in the optimal path’s performance.
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Physics-assisted cascade neural network model for predicting pressure losses of a three-phase mixture in a pipeline
Computer Research and Modeling, 2026, v. 18, no. 1, pp. 117-131The paper presents a cascade model of a physically supported neural network designed to predict pressure drop in three-phase flow (oil, gas, water) in a pipe section with various angles of inclination. To overcome the constraints of existing empirical correlations and computation-intensive numerical modeling methods, we propose an architecture that decomposes the problem into three sequential physically interpretable subtasks: regression prediction of the fluid hold-up coefficient, fluid flow regime classification, and pressure gradient evaluation. Each subtask is solved by a separate fully connected neural network, the output of which is passed to the next model in the cascade. Training and testing of the proposed architecture was performed on an extensive synthetic dataset (8 · 107 records) generated using a semi-empirical model. Verification is performed on independent experimental data. A comparative analysis with a single fully connected (non-cascade) neural network is made, and the sensitivity of the models is examined using Sobol and Borgonovo methods. The cascade model demonstrates superior accuracy and ensures high interpretability of results by providing intermediate physical parameters (fluid hold-up coefficient, flow regime). The developed model has low computational complexity, which allows it to be used in real-time systems and digital twins of hydraulic systems in the oil and gas industry.
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The optimization approach to simulation modeling of microstructures
Computer Research and Modeling, 2013, v. 5, no. 4, pp. 597-606Views (last year): 4. Citations: 7 (RSCI).The paper presents an optimization approach to microstructure simulation. Porosity function was optimized by numerical method, grain-size model was optimized by complex method based on criteria of model quality. Methods have been validated on examples. Presented new regression model of model quality. Actual application of proposed method is 3D reconstruction of core sample microstructure. Presented results suggest to prolongation of investigations.
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Mathematical modeling of the population dynamics of different age-group workers in the regional economy
Computer Research and Modeling, 2014, v. 6, no. 3, pp. 441-454The article deals with the nonlinear model of population dynamics of different ages workers in the regional economy. The model is built on the principles underlying modeling in econophysics. The authors demonstrate the complex dynamics of the model regimes that impose fundamental limits on medium- and long-term forecast of employment in a region. By analogy with the biophysical approach the authors propose a classification of social interactions of the different age-group workers. The model analysis is given for the level of employment among age groups. The verification of the model performs on the statistical data of the Jewish Autonomous Region.
Keywords: nonlinear dynamics, econophysics, biophysics, age group, employed population, employment, region.Views (last year): 4. Citations: 15 (RSCI). -
Molecular model of OCP-phycobilisome complex formation
Computer Research and Modeling, 2014, v. 6, no. 5, pp. 761-774A molecular model of phicobilisome complex with a quenching protein OCP which regulates the energy transfer from phicobilisome to photosystem in photosynthetic apparatus of cyanobacteria has been developed. In the model obtained a well known spatial structure of interacting proteins remains intact and also the energy transfer from phycobilisome to OCP with reasonable rates is possible. Free energy of complex formation was calculated using MM–PBSA approach. By the order of magnitude this energy is about tens of kJ/mole. This value correlates well with experimental observed low stability of this complex. The specific surface energy of interaction between hydrophylic phicobilisome and OCP is twice larger than specific surface energy of their interaction with water. This reflects a high molecular complementary of interacting protein surfaces and is a strong pro argument for proposed model.
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Investigation of individual-based mechanisms of single-species population dynamics by logical deterministic cellular automata
Computer Research and Modeling, 2015, v. 7, no. 6, pp. 1279-1293Views (last year): 16. Citations: 3 (RSCI).Investigation of logical deterministic cellular automata models of population dynamics allows to reveal detailed individual-based mechanisms. The search for such mechanisms is important in connection with ecological problems caused by overexploitation of natural resources, environmental pollution and climate change. Classical models of population dynamics have the phenomenological nature, as they are “black boxes”. Phenomenological models fundamentally complicate research of detailed mechanisms of ecosystem functioning. We have investigated the role of fecundity and duration of resources regeneration in mechanisms of population growth using four models of ecosystem with one species. These models are logical deterministic cellular automata and are based on physical axiomatics of excitable medium with regeneration. We have modeled catastrophic death of population arising from increasing of resources regeneration duration. It has been shown that greater fecundity accelerates population extinction. The investigated mechanisms are important for understanding mechanisms of sustainability of ecosystems and biodiversity conservation. Prospects of the presented modeling approach as a method of transparent multilevel modeling of complex systems are discussed.
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Development of methodology for computational analysis of thermo-hydraulic processes proceeding in fast-neutron reactor with FlowVision CFD software
Computer Research and Modeling, 2017, v. 9, no. 1, pp. 87-94Views (last year): 6. Citations: 1 (RSCI).An approach to numerical analysis of thermo-hydraulic processes proceeding in a fast-neutron reactor is described in the given article. The description covers physical models, numerical schemes and geometry simplifications accepted in the computational model. Steady-state and dynamic regimes of reactor operation are considered. The steady-state regimes simulate the reactor operation at nominal power. The dynamic regimes simulate the shutdown reactor cooling by means of the heat-removal system.
Simulation of thermo-hydraulic processes is carried out in the FlowVision CFD software. A mathematical model describing the coolant flow in the first loop of the fast-neutron reactor was developed on the basis of the available geometrical model. The flow of the working fluid in the reactor simulator is calculated under the assumption that the fluid density does not depend on pressure, with use a $k–\varepsilon$ turbulence model, with use of a model of dispersed medium, and with account of conjugate heat exchange. The model of dispersed medium implemented in the FlowVision software allowed taking into account heat exchange between the heat-exchanger lops. Due to geometric complexity of the core region, the zones occupied by the two heat exchangers were modeled by hydraulic resistances and heat sources.
Numerical simulation of the coolant flow in the FlowVision software enabled obtaining the distributions of temperature, velocity and pressure in the entire computational domain. Using the model of dispersed medium allowed calculation of the temperature distributions in the second loops of the heat exchangers. Besides that, the variation of the coolant temperature along the two thermal probes is determined. The probes were located in the cool and hot chambers of the fast-neutron reactor simulator. Comparative analysis of the numerical and experimental data has shown that the developed mathematical model is correct and, therefore, it can be used for simulation of thermo-hydraulic processes proceeding in fast-neutron reactors with sodium coolant.
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Interaction of a breather with a domain wall in a two-dimensional O(3) nonlinear sigma model
Computer Research and Modeling, 2017, v. 9, no. 5, pp. 773-787Views (last year): 6.By numerical simulation methods the interaction processes of oscillating soliton (breather) with a 180-degree Neel domain wall in the framework of a (2 + 1)-dimensional supersymmetric O(3) nonlinear sigma model is studied. The purpose of this paper is to investigate nonlinear evolution and stability of a system of interacting localized dynamic and topological solutions. To construct the interaction models, were used a stationary breather and domain wall solutions, where obtained in the framework of the two-dimensional sine-Gordon equation by adding specially selected perturbations to the A3-field vector in the isotopic space of the Bloch sphere. In the absence of an external magnetic field, nonlinear sigma models have formal Lorentz invariance, which allows constructing, in particular, moving solutions and analyses the experimental data of the nonlinear dynamics of an interacting solitons system. In this paper, based on the obtained moving localized solutions, models for incident and head-on collisions of breathers with a domain wall are constructed, where, depending on the dynamic parameters of the system, are observed the collisions and reflections of solitons from each other, a long-range interactions and also the decay of an oscillating soliton into linear perturbation waves. In contrast to the breather solution that has the dynamics of the internal degree of freedom, the energy integral of a topologically stable soliton in the all experiments the preserved with high accuracy. For each type of interaction, the range of values of the velocity of the colliding dynamic and topological solitons is determined as a function of the rotation frequency of the A3-field vector in the isotopic space. Numerical models are constructed on the basis of methods of the theory of finite difference schemes, using the properties of stereographic projection, taking into account the group-theoretical features of constructions of the O(N) class of nonlinear sigma models of field theory. On the perimeter of the two-dimensional modeling area, specially developed boundary conditions are established that absorb linear perturbation waves radiated by interacting soliton fields. Thus, the simulation of the interaction processes of localized solutions in an infinite two-dimensional phase space is carried out. A software module has been developed that allows to carry out a complex analysis of the evolution of interacting solutions of nonlinear sigma models of field theory, taking into account it’s group properties in a two-dimensional pseudo-Euclidean space. The analysis of isospin dynamics, as well the energy density and energy integral of a system of interacting dynamic and topological solitons is carried out.
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Traffic flow speed prediction on transportation graph with convolutional neural networks
Computer Research and Modeling, 2018, v. 10, no. 3, pp. 359-367Views (last year): 36.The short-term prediction of road traffic condition is one of the main tasks of transportation modelling. The main purpose of which are traffic control, reporting of accidents, avoiding traffic jams due to knowledge of traffic flow and subsequent transportation planning. A number of solutions exist — both model-driven and data driven had proven to be successful in capturing the dynamics of traffic flow. Nevertheless, most space-time models suffer from high mathematical complexity and low efficiency. Artificial Neural Networks, one of the prominent datadriven approaches, show promising performance in modelling the complexity of traffic flow. We present a neural network architecture for traffic flow prediction on a real-world road network graph. The model is based on the combination of a recurrent neural network and graph convolutional neural network. Where a recurrent neural network is used to model temporal dependencies, and a convolutional neural network is responsible for extracting spatial features from traffic. To make multiple few steps ahead predictions, the encoder-decoder architecture is used, which allows to reduce noise propagation due to inexact predictions. To model the complexity of traffic flow, we employ multilayered architecture. Deeper neural networks are more difficult to train. To speed up the training process, we use skip-connections between each layer, so that each layer teaches only the residual function with respect to the previous layer outputs. The resulting neural network was trained on raw data from traffic flow detectors from the US highway system with a resolution of 5 minutes. 3 metrics: mean absolute error, mean relative error, mean-square error were used to estimate the quality of the prediction. It was found that for all metrics the proposed model achieved lower prediction error than previously published models, such as Vector Auto Regression, LSTM and Graph Convolution GRU.
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