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The key problems of remote forest pathology monitoring for coniferous forests affected by insect pests have been analyzed. It has been demonstrated that addressing these tasks requires the use of multiclass classification results for coniferous trees in high- and ultra-high-resolution images, which are promptly obtained through monitoring via satellites or unmanned aerial vehicles (UAVs). An analytical review of modern models and methods for multiclass classification of coniferous forest images was conducted, leading to the development of three fully convolutional neural network models: Mo-U-Net, At-Mo-U-Net, and Res-Mo-U-Net, all based on the classical U-Net architecture. Additionally, the Segformer transformer model was modified to suit the task. For RGB images of fir trees Abies sibirica affected by the four-eyed bark beetle Polygraphus proximus, captured using a UAV-mounted camera, two datasets were created: the first dataset contains image fragments and their corresponding reference segmentation masks sized 256 × 256 × 3 pixels, while the second dataset contains fragments sized 480 × 480 × 3 pixels. Comprehensive studies were conducted on each trained neural network model to evaluate both classification accuracy for assessing the degree of damage (health status) of Abies sibirica trees and computation speed using test datasets from each set. The results revealed that for fragments sized 256 × 256 × 3 pixels, the At-Mo-U-Net model with an attention mechanism is preferred alongside the Modified Segformer model. For fragments sized 480 × 480 × 3 pixels, the Res-Mo-U-Net hybrid model with residual blocks demonstrated superior performance. Based on classification accuracy and computation speed results for each developed model, it was concluded that, for production-scale multiclass classification of affected fir trees, the Res-Mo-U-Net model is the most suitable choice. This model strikes a balance between high classification accuracy and fast computation speed, meeting conflicting requirements effectively.

We propose an approach for the reconstruction and quantitative phenotyping of plant morphological traits at early ontogenetic stages based on digital image analysis. The proposed algorithm combines deep learning and graph-based representations while incorporating biological principles of morphogenesis. This integration enables the transition from binary segmentation to the reconstruction of a topologically consistent plant structure with accurate separation of intersecting root systems in images containing multiple plants. At the first stage, binary masks of seeds, shoots, and root systems are generated using a U-Net convolutional neural network architecture. The resulting image is transformed into a graph model in which edges correspond to root and shoot segments, while vertices represent key morphological points, including branching and intersection nodes. A directed traversal algorithm initialized from the seed point, combined with watershed-based graph partitioning and a composite scoring function for primary axis selection, identifies individual plants as isolated subgraphs and accurately distinguishes the primary root, lateral roots, and shoot. The validity of the algorithm was confirmed through a multi-level validation procedure, including comparison of graph reconstruction results on segmented images and end-to-end evaluation of the complete computational pipeline on original images against existing software solutions and expert manual annotations. The proposed approach is robust to variability in root system morphology and image noise and provides high accuracy in morphological trait extraction. The results of this study can be applied in plant breeding programs.

This article considers the task of multiclass classification of coniferous trees with varying degrees of damage by insect pests on images obtained using unmanned aerial vehicles (UAVs). We propose the use of convolutional neural networks (CNNs) for the classification of fir trees Abies sibirica and Siberian pine trees Pinus sibirica in unmanned aerial vehicles (UAV) imagery. In our approach, we develop three CNN models based on the classical U-Net architecture, designed for pixel-wise classification of images (semantic segmentation). The first model, Mo-U-Net, incorporates several changes to the classical U-Net model. The second and third models, MSC-U-Net and MSC-Res-U-Net, respectively, form ensembles of three Mo-U-Net models, each varying in depth and input image sizes. Additionally, the MSC-Res-U-Net model includes the integration of residual blocks. To validate our approach, we have created two datasets of UAV images depicting trees affected by pests, specifically Abies sibirica and Pinus sibirica, and trained the proposed three CNN models utilizing mIoULoss and Focal Loss as loss functions. Subsequent evaluation focused on the effectiveness of each trained model in classifying damaged trees. The results obtained indicate that when mIoULoss served as the loss function, the proposed models fell short of practical applicability in the forestry industry, failing to achieve classification accuracy above the threshold value of 0.5 for individual classes of both tree species according to the IoU metric. However, under Focal Loss, the MSC-Res-U-Net and Mo-U-Net models, in contrast to the third proposed model MSC-U-Net, exhibited high classification accuracy (surpassing the threshold value of 0.5) for all classes of Abies sibirica and Pinus sibirica trees. Thus, these results underscore the practical significance of the MSC-Res-U-Net and Mo-U-Net models for forestry professionals, enabling accurate classification and early detection of pest outbreaks in coniferous trees.