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A study on the dynamics of pest population with biocontrol using predator, parasite in presence of awareness
Computer Research and Modeling, 2024, v. 16, no. 3, pp. 713-729The coconut tree is often mentioned as the “tree of life” due to its immense benefits to the human community ranging from edible products to building materials. Rugose spiraling whitefly (RSW), a natural enemy seems to be a major threat to farmers in bringing up these coconut trees. A mathematical model to study the dynamics of pest population in the presence of predator and parasite is developed. The biologically feasible equilibrium points are derived. Local asymptotic stability as well as global asymptotic stability is analyzed at the points. Furthermore, in order to educate farmers on pest control, we have added the impact of awareness programs in the model. The conditions of existence and stability properties of all feasible steady states of this model are analyzed. The result reveals that predator and parasite play a major role in reducing the immature pest. It also shows that pest control activities through awareness programs further reduce the mature pest population which decreases the egg laying rate which in turn reduces the immature population.
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Computational algorithm for solving the nonlinear boundary-value problem of hydrogen permeability with dynamic boundary conditions and concentration-dependent diffusion coefficient
Computer Research and Modeling, 2024, v. 16, no. 5, pp. 1179-1193The article deals with the nonlinear boundary-value problem of hydrogen permeability corresponding to the following experiment. A membrane made of the target structural material heated to a sufficiently high temperature serves as the partition in the vacuum chamber. Degassing is performed in advance. A constant pressure of gaseous (molecular) hydrogen is built up at the inlet side. The penetrating flux is determined by mass-spectrometry in the vacuum maintained at the outlet side.
A linear model of dependence on concentration is adopted for the coefficient of dissolved atomic hydrogen diffusion in the bulk. The temperature dependence conforms to the Arrhenius law. The surface processes of dissolution and sorptiondesorption are taken into account in the form of nonlinear dynamic boundary conditions (differential equations for the dynamics of surface concentrations of atomic hydrogen). The characteristic mathematical feature of the boundary-value problem is that concentration time derivatives are included both in the diffusion equation and in the boundary conditions with quadratic nonlinearity. In terms of the general theory of functional differential equations, this leads to the so-called neutral type equations and requires a more complex mathematical apparatus. An iterative computational algorithm of second-(higher- )order accuracy is suggested for solving the corresponding nonlinear boundary-value problem based on explicit-implicit difference schemes. To avoid solving the nonlinear system of equations at every time step, we apply the explicit component of difference scheme to slower sub-processes.
The results of numerical modeling are presented to confirm the fitness of the model to experimental data. The degrees of impact of variations in hydrogen permeability parameters (“derivatives”) on the penetrating flux and the concentration distribution of H atoms through the sample thickness are determined. This knowledge is important, in particular, when designing protective structures against hydrogen embrittlement or membrane technologies for producing high-purity hydrogen. The computational algorithm enables using the model in the analysis of extreme regimes for structural materials (pressure drops, high temperatures, unsteady heating), identifying the limiting factors under specific operating conditions, and saving on costly experiments (especially in deuterium-tritium investigations).
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The model of switching mode of reproduction with a continuous set of production subsystems under the conditions of balanced growth
Computer Research and Modeling, 2025, v. 17, no. 3, pp. 501-519This paper presents new research results that have been conducted at the Institute of Economics of the Russian Academy of Sciences since 2011 under the leadership of Academician of the Russian Academy of Sciences V. I.Mayevsky. These works are aimed at developing the theory of switching mode of reproduction and corresponding mathematical models, the peculiarity of which is that they explicitly model the interaction of the financial and real sectors of the economy, and the country’s economy itself is not disaggregated according to the sectoral principle (engineering, agriculture, services, etc.), but by production subsystems that differ from each other by the age of the fixed capital. One of the mathematical difficulties of working with such models, called models of switching mode of reproduction (SMR), is the difficulty of modeling competitive relationships between subsystems of different “ages”. Therefore, until now, the interaction of a finite number of production subsystems has been considered in the SMR models, the models themselves were of a discrete-continuous nature, calculations were done exclusively on computers, and obtaining analytical dependencies was difficult. This paper shows that for the special case of balanced economic growth and a continuum of production subsystems, it is possible to obtain analytical expressions that allow a better understanding of the impact of monetary policy on economic dynamics. In addition to purely scientific interest, this is of great practical importance, since it allows us to assess the possible reaction of the real sector of the economy to changes in the monetary sphere without conducting complex simulation calculations.
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Empirical testing of institutional matrices theory by data mining
Computer Research and Modeling, 2015, v. 7, no. 4, pp. 923-939The paper has a goal to identify a set of parameters of the environment and infrastructure with the most significant impact on institutional-matrices that dominate in different countries. Parameters of environmental conditions includes raw statistical indices, which were directly derived from the databases of open access, as well as complex integral indicators that were by method of principal components. Efficiency of discussed parameters in task of dominant institutional matrices type recognition (X or Y type) was evaluated by a number of methods based on machine learning. It was revealed that greatest informational content is associated with parameters characterizing risk of natural disasters, level of urbanization and the development of transport infrastructure, the monthly averages and seasonal variations of temperature and precipitation.
Keywords: institutional matrices theory, machine learning.Views (last year): 7. Citations: 13 (RSCI). -
On possible changes in phytocenoses of the Sea of Azov under climate warming
Computer Research and Modeling, 2017, v. 9, no. 6, pp. 981-991Views (last year): 11.Base long-term modern scenarios of hydrochemical and temperature regimes of the Sea of Azov were considered. New schemes of modeling mechanisms of algal adaptation to changes in the hydrochemical regime and temperature were proposed. In comparison to the traditional ecological-evolutionary schemes, these models have a relatively small dimension, high speed and allow carrying out various calculations on long-term perspective (evolutionally significant times). Based on the ecology-evolutionary model of the lower trophic levels the impact of these environmental factors on the dynamics and microevolution of algae in the Sea of Azov was estimated. In each scenario, the calculations were made for 100 years, with the final values of the variables and parameters not depending on the choice of the initial values. In the process of such asymptotic computer analysis, it was found that as a result of climate warming and temperature adaptation of organisms, the average annual biomass of thermophilic algae (Pyrrophyta and Cyanophyta) naturally increases. However, for a number of diatom algae (Bacillariophyta), even with their temperature adaptation, the average annual biomass may unexpectedly decrease. Probably, this phenomenon is associated with a toughening of competition between species with close temperature parameters of existence. The influence of the variation in the chemical composition of the Don River’s flow on the dynamics of nutrients and algae of the Sea of Azov was also investigated. It turned out that the ratio of organic forms of nitrogen and phosphorus in sea waters varies little. This stabilization phenomenon will take place for all high-productive reservoirs with low flow, due to autochthonous origin of larger part of organic matter in water bodies of this type.
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Stress-induced duplex destabilization (SIDD) profiles for T7 bacteriophage promoters
Computer Research and Modeling, 2018, v. 10, no. 6, pp. 867-878Views (last year): 18.The functioning of DNA regulatory regions rely primarily on their physicochemical and structural properties but not on nucleotide sequences, i.e. ‘genetic text’. The formers are responsible for coding of DNA-protein interactions that govern various regulatory events. One of the characteristics is SIDD (Stress-Induced Duplex Destabilization) that quantify DNA duplex region propensity to melt under the imposed superhelical stress. The duplex property has been shown to participate in activity of various regulatory regions. Here we employ the SIDD model to calculate melting probability profiles for T7 bacteriophage promoter sequences. The genome is characterized by small size (approximately 40 thousand nucleotides) and temporal organization of expression: at the first stage of infection early T7 DNA region is transcribed by the host cell RNA polymerase, later on in life cycle phage-specific RNA polymerase performs transcription of class II and class III genes regions. Differential recognition of a particular group of promoters by the enzyme cannot be solely explained by their nucleotide sequences, because of, among other reasons, it is fairly similar among most the promoters. At the same time SIDD profiles obtained vary significantly and are clearly separated into groups corresponding to functional promoter classes of T7 DNA. For example, early promoters are affected by the same maximally destabilized DNA duplex region located at the varying region of a particular promoter. class II promoters lack substantially destabilized regions close to transcription start sites. Class III promoters, in contrast, demonstrate characteristic melting probability maxima located in the near-downstream region in all cases. Therefore, the apparent differences among the promoter groups with exceptional textual similarity (class II and class III differ by only few singular substitutions) were established. This confirms the major impact of DNA primary structure on the duplex parameter as well as a need for a broad genetic context consideration. The differences in melting probability profiles obtained using SIDD model alongside with other DNA physicochemical properties appears to be involved in differential promoter recognition by RNA polymerases.
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Mathematical modelling of tensegrity robots with rigid rods
Computer Research and Modeling, 2020, v. 12, no. 4, pp. 821-830In this paper, we address the mathematical modeling of robots based on tensegrity structures. The pivotal property of such structures is the forming elements working only for compression or tension, which allows the use of materials and structural solutions that minimize the weight of the structure while maintaining its strength.
Tensegrity structures hold several properties important for collaborative robotics, exploration and motion tasks in non-deterministic environments: natural compliance, compactness for transportation, low weight with significant impact resistance and rigidity. The control of such structures remains an open research problem, which is associated with the complexity of describing the dynamics of such structures.
We formulate an approach for describing the dynamics of such structures, based on second-order dynamics of the Cartesian coordinates of structure elements (rods), first-order dynamics for angular velocities of rods, and first-order dynamics for quaternions that are used to describe the orientation of rods. We propose a numerical method for solving these dynamic equations. The proposed methods are implemented in the form of a freely distributed mathematical package with open source code.
Further, we show how the provided software package can be used for modeling the dynamics and determining the operating modes of tensegrity structures. We present an example of a tensegrity structure moving in zero gravity with three rigid rods and nine elastic elements working in tension (cables), showing the features of the dynamics of the structure in reaching the equilibrium position. The range of initial conditions for which the structure operates in the normal mode is determined. The results can be directly used to analyze the nature of passive dynamic movements of the robots based on a three-link tensegrity structure, considered in the paper; the proposed modeling methods and the developed software are suitable for modeling a significant variety of tensegrity robots.
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Assessment of the elite–people interaction in post-soviet countries using the Bayesian approach
Computer Research and Modeling, 2021, v. 13, no. 6, pp. 1233-1247A previously developed model that describes the dynamics of social tension in a society divided into two groups: the elite and the people was considered. This model took into account the impact of economic situation changes and the elite–people interaction. The model has been modified by including in the equation describing the tension of the people, a term that takes into account the adaptation of the people to the current situation.
The model coefficients estimation is an important task, the solution of which allows obtaining information about the nature of the interaction between elite and people. We believe that the solution of the system of model equations with optimal coefficients is closest to the values of the indicator characterizing social tension. We used the normalized level of homicide rate as an indicator of social tension.
The model contains seven coefficients. Two coefficients characterizing the influence of economic situation changes on elite and people are taken equal to each other and the same for all countries. We obtained their estimations using a simplified model that takes into account only the change in the economic situation and allows an analytical solution.
The Bayesian approach was used to estimate the remaining five coefficients of model for post-Soviet countries. The prior probability densities of the four coefficients for all countries under consideration were taken to be the same. The prior probability density of fifth coefficient was considered to depend on the regime of government (authoritarian or «transitional»). We assumed that the calculated tension matches with the corresponding indicator of tension in cases where the difference between them does not exceed 5%.
The calculations showed that for the post-Soviet countries, a good coincidence was obtained between the calculated values of the people tension and the normalized level of homicide rate. The coincidence is satisfactory only on average.
The following main results was obtained at the work: under the influence of some «significant» events in 40% of post-Soviet countries, there was a rapid change in the nature of interaction between the elite and the people; regional feature have some influence on the elite–people interaction; the type of government does not significantly affect the elite–people interaction; the method for assessing the stability of the country by the value of the model coefficients is proposed.
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Analysing the impact of migration on background social strain using a continuous social stratification model
Computer Research and Modeling, 2022, v. 14, no. 3, pp. 661-673The background social strain of a society can be quantitatively estimated using various statistical indicators. Mathematical models, allowing to forecast the dynamics of social strain, are successful in describing various social processes. If the number of interacting groups is small, the dynamics of the corresponding indicators can be modelled with a system of ordinary differential equations. The increase in the number of interacting components leads to the growth of complexity, which makes the analysis of such models a challenging task. A continuous social stratification model can be considered as a result of the transition from a discrete number of interacting social groups to their continuous distribution in some finite interval. In such a model, social strain naturally spreads locally between neighbouring groups, while in reality, the social elite influences the whole society via news media, and the Internet allows non-local interaction between social groups. These factors, however, can be taken into account to some extent using the term of the model, describing negative external influence on the society. In this paper, we develop a continuous social stratification model, describing the dynamics of two societies connected through migration. We assume that people migrate from the social group of donor society with the highest strain level to poorer social layers of the acceptor society, transferring the social strain at the same time. We assume that all model parameters are constants, which is a realistic assumption for small societies only. By using the finite volume method, we construct the spatial discretization for the problem, capable of reproducing finite propagation speed of social strain. We verify the discretization by comparing the results of numerical simulations with the exact solutions of the auxiliary non-linear diffusion equation. We perform the numerical analysis of the proposed model for different values of model parameters, study the impact of migration intensity on the stability of acceptor society, and find the destabilization conditions. The results, obtained in this work, can be used in further analysis of the model in the more realistic case of inhomogeneous coefficients.
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Harvesting impact on population dynamics with age and sex structure: optimal harvesting and the hydra effect
Computer Research and Modeling, 2022, v. 14, no. 5, pp. 1107-1130Based on the time-discrete model, we study the effect of selective proportional harvesting on the population dynamics with age and sex structure. When constructing the model, we assume that the population birth rate depends on the ratio of the sexes and the number of formed pairs. The regulation of population growth is carried out by limiting the juvenile’s survival when the survival of immature individuals decreases with an increase in the numbers of sex and age classes. We consider cases where the harvest is carried out only from a younger age class or from a group of mature females or males. We find that the harvesting of males or females at the optimal level is responsible for changing the ratio of females to males (taking into account the average size of the harem). We show that the maximum number of harvested males is achieved either at such a harvest rate when their excess number is withdrawn and the balance of sexes is established or at such an optimal catch quota at which the sex ratio is shifted towards breeding females. Optimal female harvesting, in which the highest number of them are taken, either maintains a preexisting shortage of adult males or leads to an excess of males or the fixing of a sex balance. We find that, depending on the population parameters for all considered harvesting strategies, the hydra effect can observe, i. e., the equilibrium size of the exploited sex and age-specific group (after reproduction) can increase with the growth of harvesting intensity. The selective harvesting, due to which the hydra effect occurs, simultaneously leads to an increase remaining population size and the number of harvested individuals. At the same time, the size of the exploited group after reproduction can become even more than without exploitation. Equilibrium harvesting with the optimal harvest rate that maximizes yield leads to a population size decrease. The effect of hydra is at lower values of the catch quota than the optimal harvest rate. At the same time, the consequence of the hydra effect may be a higher abundance of the age-sex group under optimal exploitation compared to the level observed in the absence of harvesting.
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