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Modern methods of mathematical modeling of blood flow using reduced order methods
Computer Research and Modeling, 2018, v. 10, no. 5, pp. 581-604Views (last year): 62. Citations: 2 (RSCI).The study of the physiological and pathophysiological processes in the cardiovascular system is one of the important contemporary issues, which is addressed in many works. In this work, several approaches to the mathematical modelling of the blood flow are considered. They are based on the spatial order reduction and/or use a steady-state approach. Attention is paid to the discussion of the assumptions and suggestions, which are limiting the scope of such models. Some typical mathematical formulations are considered together with the brief review of their numerical implementation. In the first part, we discuss the models, which are based on the full spatial order reduction and/or use a steady-state approach. One of the most popular approaches exploits the analogy between the flow of the viscous fluid in the elastic tubes and the current in the electrical circuit. Such models can be used as an individual tool. They also used for the formulation of the boundary conditions in the models using one dimensional (1D) and three dimensional (3D) spatial coordinates. The use of the dynamical compartment models allows describing haemodynamics over an extended period (by order of tens of cardiac cycles and more). Then, the steady-state models are considered. They may use either total spatial reduction or two dimensional (2D) spatial coordinates. This approach is used for simulation the blood flow in the region of microcirculation. In the second part, we discuss the models, which are based on the spatial order reduction to the 1D coordinate. The models of this type require relatively small computational power relative to the 3D models. Within the scope of this approach, it is also possible to include all large vessels of the organism. The 1D models allow simulation of the haemodynamic parameters in every vessel, which is included in the model network. The structure and the parameters of such a network can be set according to the literature data. It also exists methods of medical data segmentation. The 1D models may be derived from the 3D Navier – Stokes equations either by asymptotic analysis or by integrating them over a volume. The major assumptions are symmetric flow and constant shape of the velocity profile over a cross-section. These assumptions are somewhat restrictive and arguable. Some of the current works paying attention to the 1D model’s validation, to the comparing different 1D models and the comparing 1D models with clinical data. The obtained results reveal acceptable accuracy. It allows concluding, that the 1D approach can be used in medical applications. 1D models allow describing several dynamical processes, such as pulse wave propagation, Korotkov’s tones. Some physiological conditions may be included in the 1D models: gravity force, muscles contraction force, regulation and autoregulation.
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Modeling the spatial scenario of the transition to chaos via torus breakup in the problem with concentration-dependent diffusion
Computer Research and Modeling, 2020, v. 12, no. 1, pp. 9-31In the last decades, universal scenarios of the transition to chaos in dynamic systems have been well studied. The scenario of the transition to chaos is defined as a sequence of bifurcations that occur in the system under the variation one of the governing parameters and lead to a qualitative change in dynamics, starting from the regular mode and ending with chaotic behavior. Typical scenarios include a cascade of period doubling bifurcations (Feigenbaum scenario), the breakup of a low-dimensional torus (Ruelle–Takens scenario), and the transition to chaos through the intermittency (Pomeau–Manneville scenario). In more complicated spatially distributed dynamic systems, the complexity of dynamic behavior growing with a parameter change is closely intertwined with the formation of spatial structures. However, the question of whether the spatial and temporal axes could completely exchange roles in some scenario still remains open. In this paper, for the first time, we propose a mathematical model of convection–diffusion–reaction, in which a spatial transition to chaos through the breakup of the quasi–periodic regime is realized in the framework of the Ruelle–Takens scenario. The physical system under consideration consists of two aqueous solutions of acid (A) and base (B), initially separated in space and placed in a vertically oriented Hele–Shaw cell subject to the gravity field. When the solutions are brought into contact, the frontal neutralization reaction of the second order A + B $\to$ C begins, which is accompanied by the production of salt (C). The process is characterized by a strong dependence of the diffusion coefficients of the reagents on their concentration, which leads to the appearance of two local zones of reduced density, in which chemoconvective fluid motions develop independently. Although the layers, in which convection develops, all the time remain separated by the interlayer of motionless fluid, they can influence each other via a diffusion of reagents through this interlayer. The emerging chemoconvective structure is the modulated standing wave that gradually breaks down over time, repeating the sequence of the bifurcation chain of the Ruelle–Takens scenario. We show that during the evolution of the system one of the spatial axes, directed along the reaction front, plays the role of time, and time itself starts to play the role of a control parameter.
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Experimental study of the dynamics of single and connected in a lattice complex-valued mappings: the architecture and interface of author’s software for modeling
Computer Research and Modeling, 2021, v. 13, no. 6, pp. 1101-1124The paper describes a free software for research in the field of holomorphic dynamics based on the computational capabilities of the MATLAB environment. The software allows constructing not only single complex-valued mappings, but also their collectives as linearly connected, on a square or hexagonal lattice. In the first case, analogs of the Julia set (in the form of escaping points with color indication of the escape velocity), Fatou (with chaotic dynamics highlighting), and the Mandelbrot set generated by one of two free parameters are constructed. In the second case, only the dynamics of a cellular automaton with a complex-valued state of the cells and of all the coefficients in the local transition function is considered. The abstract nature of object-oriented programming makes it possible to combine both types of calculations within a single program that describes the iterated dynamics of one object.
The presented software provides a set of options for the field shape, initial conditions, neighborhood template, and boundary cells neighborhood features. The mapping display type can be specified by a regular expression for the MATLAB interpreter. This paper provides some UML diagrams, a short introduction to the user interface, and some examples.
The following cases are considered as example illustrations containing new scientific knowledge:
1) a linear fractional mapping in the form $Az^{n} +B/z^{n} $, for which the cases $n=2$, $4$, $n>1$, are known. In the portrait of the Fatou set, attention is drawn to the characteristic (for the classical quadratic mapping) figures of <>, showing short-period regimes, components of conventionally chaotic dynamics in the sea;
2) for the Mandelbrot set with a non-standard position of the parameter in the exponent $z(t+1)\Leftarrow z(t)^{\mu } $ sketch calculations reveal some jagged structures and point clouds resembling Cantor's dust, which are not Cantor's bouquets that are characteristic for exponential mapping. Further detailing of these objects with complex topology is required.
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Application of the grid-characteristic method for mathematical modeling in dynamical problems of deformable solid mechanics
Computer Research and Modeling, 2019, v. 11, no. 6, pp. 1041-1048 -
Analysis of the basic equation of the physical and statistical approach within reliability theory of technical systems
Computer Research and Modeling, 2020, v. 12, no. 4, pp. 721-735Verification of the physical-statistical approach within reliability theory for the simplest cases was carried out, which showed its validity. An analytical solution of the one-dimensional basic equation of the physicalstatistical approach is presented under the assumption of a stationary degradation rate. From a mathematical point of view this equation is the well-known continuity equation, where the role of density is played by the density distribution function of goods in its characteristics phase space, and the role of fluid velocity is played by intensity (rate) degradation processes. The latter connects the general formalism with the specifics of degradation mechanisms. The cases of coordinate constant, linear and quadratic degradation rates are analyzed using the characteristics method. In the first two cases, the results correspond to physical intuition. At a constant rate of degradation, the shape of the initial distribution is preserved, and the distribution itself moves equably from the zero. At a linear rate of degradation, the distribution either narrows down to a narrow peak (in the singular limit), or expands, with the maximum shifting to the periphery at an exponentially increasing rate. The distribution form is also saved up to the parameters. For the initial normal distribution, the coordinates of the largest value of the distribution maximum for its return motion are obtained analytically.
In the quadratic case, the formal solution demonstrates counterintuitive behavior. It consists in the fact that the solution is uniquely defined only on a part of an infinite half-plane, vanishes along with all derivatives on the boundary, and is ambiguous when crossing the boundary. If you continue it to another area in accordance with the analytical solution, it has a two-humped appearance, retains the amount of substance and, which is devoid of physical meaning, periodically over time. If you continue it with zero, then the conservativeness property is violated. The anomaly of the quadratic case is explained, though not strictly, by the analogy of the motion of a material point with an acceleration proportional to the square of velocity. Here we are dealing with a mathematical curiosity. Numerical calculations are given for all cases. Additionally, the entropy of the probability distribution and the reliability function are calculated, and their correlation is traced.
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Numerical modeling of the natural convection of a non-Newtonian fluid in a closed cavity
Computer Research and Modeling, 2020, v. 12, no. 1, pp. 59-72In this paper, a time-dependent natural convective heat transfer in a closed square cavity filled with non- Newtonian fluid was considered in the presence of an isothermal energy source located on the lower wall of the region under consideration. The vertical boundaries were kept at constant low temperature, while the horizontal walls were completely insulated. The behavior of a non-Newtonian fluid was described by the Ostwald de Ville power law. The process under study was described by transient partial differential equations using dimensionless non-primitive variables “stream function – vorticity – temperature”. This method allows excluding the pressure field from the number of unknown parameters, while the non-dimensionalization allows generalizing the obtained results to a variety of physical formulations. The considered mathematical model with the corresponding boundary conditions was solved on the basis of the finite difference method. The algebraic equation for the stream function was solved by the method of successive lower relaxation. Discrete analogs of the vorticity equation and energy equation were solved by the Thomas algorithm. The developed numerical algorithm was tested in detail on a class of model problems and good agreement with other authors was achieved. Also during the study, the mesh sensitivity analysis was performed that allows choosing the optimal mesh.
As a result of numerical simulation of unsteady natural convection of a non-Newtonian power-law fluid in a closed square cavity with a local isothermal energy source, the influence of governing parameters was analyzed including the impact of the Rayleigh number in the range 104–106, power-law index $n = 0.6–1.4$, and also the position of the heating element on the flow structure and heat transfer performance inside the cavity. The analysis was carried out on the basis of the obtained distributions of streamlines and isotherms in the cavity, as well as on the basis of the dependences of the average Nusselt number. As a result, it was established that pseudoplastic fluids $(n < 1)$ intensify heat removal from the heater surface. The increase in the Rayleigh number and the central location of the heating element also correspond to the effective cooling of the heat source.
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Mathematical modeling of the age groups of employed peoples by the example of the southern regions of the Russian Far East
Computer Research and Modeling, 2016, v. 8, no. 5, pp. 787-801Views (last year): 4. Citations: 3 (RSCI).The article focuses on a nonlinear mathematical model that describes the interaction of the different age groups of the employed population. The interactions are treated by analogy with population relationship (competition, discrimination, assistance, oppression, etc). Under interaction of peoples we mean the generalized social and economic mechanisms that cause related changes in the number of employees of different age groups. Three age groups of the employed population are considered. It is young specialists (15–29 years), workers with experience (30–49 years), the employees of pre-retirement and retirement age (50 and older). The estimation of model’s parameters for the southern regions of the Far Eastern Federal District (FEFD) is executed by statistical data. Analysis of model scenarios allows us to conclude the observed number fluctuations of the different ages employees on the background of a stable total employed population may be a consequence of complex interactions between these groups of peoples. Computational experiments with the obtained values of the parameters allowed us to calculate the rate of decline and the aging of the working population and to determine the nature of the interaction between the age groups of employees that are not directly as reflected in the statistics. It was found that in FEFD the employed of 50 years and older are discriminated against by the young workers under 29, employed up to 29 and 30–49 years are in a partnership. It is shown in most developed regions (Primorsky and Khabarovsk Krai) there is “uniform” competition among different age groups of the employed population. For Primorsky Krai we were able to identify the mixing effect dynamics. It is a typical situation for systems in a state of structural adjustment. This effect is reflected in the fact the long cycles of employed population form with a significant decrease in migration inflows of employees 30–49 years. Besides, the change of migration is accompanied by a change of interaction type — from employment discrimination by the oldest of middle generation to discrimination by the middle of older generation. In less developed regions (Amur, Magadan and Jewish Autonomous Regions) there are lower values of migration balance of almost all age groups and discrimination by young workers up 29 years of other age groups and employment discrimination 30–49 years of the older generation.
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Models of phytoplankton distribution over chlorophyll in various habitat conditions. Estimation of aquatic ecosystem bioproductivity
Computer Research and Modeling, 2021, v. 13, no. 6, pp. 1177-1190A model of the phytoplankton abundance dynamics depending on changes in the content of chlorophyll in phytoplankton under the influence of changing environmental conditions is proposed. The model takes into account the dependence of biomass growth on environmental conditions, as well as on photosynthetic chlorophyll activity. The light and dark stages of photosynthesis have been identified. The processes of chlorophyll consumption during photosynthesis in the light and the growth of chlorophyll mass together with phytoplankton biomass are described. The model takes into account environmental conditions such as mineral nutrients, illumination and water temperature. The model is spatially distributed, the spatial variable corresponds to mass fraction of chlorophyll in phytoplankton. Thereby possible spreads of the chlorophyll contents in phytoplankton are taken into consideration. The model calculates the density distribution of phytoplankton by the proportion of chlorophyll in it. In addition, the rate of production of new phytoplankton biomass is calculated. In parallel, point analogs of the distributed model are considered. The diurnal and seasonal (during the year) dynamics of phytoplankton distribution by chlorophyll fraction are demonstrated. The characteristics of the rate of primary production in daily or seasonally changing environmental conditions are indicated. Model characteristics of the dynamics of phytoplankton biomass growth show that in the light this growth is about twice as large as in the dark. It shows, that illumination significantly affects the rate of production. Seasonal dynamics demonstrates an accelerated growth of biomass in spring and autumn. The spring maximum is associated with warming under the conditions of biogenic substances accumulated in winter, and the autumn, slightly smaller maximum, with the accumulation of nutrients during the summer decline in phytoplankton biomass. And the biomass in summer decreases, again due to a deficiency of nutrients. Thus, in the presence of light, mineral nutrition plays the main role in phytoplankton dynamics.
In general, the model demonstrates the dynamics of phytoplankton biomass, qualitatively similar to classical concepts, under daily and seasonal changes in the environment. The model seems to be suitable for assessing the bioproductivity of aquatic ecosystems. It can be supplemented with equations and terms of equations for a more detailed description of complex processes of photosynthesis. The introduction of variables in the physical habitat space and the conjunction of the model with satellite information on the surface of the reservoir leads to model estimates of the bioproductivity of vast marine areas. Introduction of physical space variables habitat and the interface of the model with satellite information about the surface of the basin leads to model estimates of the bioproductivity of vast marine areas.
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Mathematical modeling of thermophysical processes in the wall of the Baker cyst, when intra-cystic fluid is heated by laser radiation 1.47 μm in length
Computer Research and Modeling, 2018, v. 10, no. 1, pp. 103-112Views (last year): 21. Citations: 2 (RSCI).The work is devoted to the study of the theoretical value of destructive influence on normal tissues of an organism by infrared radiation that goes beyond the treated pathological focus. This situation is possible if the direct laser radiation on the tissues is extremely long-acting. The solution to this problem can be the uniform distribution of heat inside the volume through indirect heating of the liquid, which contributes to minimal damage to the perifocal structures. A non-stationary thermophysical model of the process of heat propagation in biological tissues is presented, allowing to carry out studies of energy transfer from internal liquid contents of Baker's cyst heated by infrared laser radiation of a given specific power through a certain thickness of its wall to surrounding biological tissues. Calculation of the spacetime temperature distribution in the cyst wall and surrounding fat tissue is carried out by the finite-difference method. The time of effective exposure to temperature on the entire thickness of the cyst wall was estimated to be 55 ° C on its outer surface. The safety procedure ensures the exposure duration of this value is not more than 10 seconds.
As a result of the calculations carried out, it is established that there are several operating modes of a surgical laser that meet all the safety requirements with a simultaneous effective procedure. Local one-sided hyperthermia of the synovial membrane and subsequent coagulation of the entire wall thickness due to heat transfer contributes to the elimination of the cavity neoplasm of the popliteal region. With a thickness of 3 mm, the heating mode is satisfactory, under which the exposure time lasts about 200 seconds, and the specific power of the laser radiation in the internal medium of the liquid contents of the Baker cyst is approximately 1.
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Mathematical modeling of the population dynamics of different age-group workers in the regional economy
Computer Research and Modeling, 2014, v. 6, no. 3, pp. 441-454The article deals with the nonlinear model of population dynamics of different ages workers in the regional economy. The model is built on the principles underlying modeling in econophysics. The authors demonstrate the complex dynamics of the model regimes that impose fundamental limits on medium- and long-term forecast of employment in a region. By analogy with the biophysical approach the authors propose a classification of social interactions of the different age-group workers. The model analysis is given for the level of employment among age groups. The verification of the model performs on the statistical data of the Jewish Autonomous Region.
Keywords: nonlinear dynamics, econophysics, biophysics, age group, employed population, employment, region.Views (last year): 4. Citations: 15 (RSCI).
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