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Parallel implementation of a finite-element algorithms on a graphics accelerator in the software package FEStudio
Computer Research and Modeling, 2014, v. 6, no. 1, pp. 79-97Views (last year): 4. Citations: 24 (RSCI).In this paper, we present new parallel algorithms for finite element analysis implemented in the FEStudio software framework. We describe the programming model of finite element method, which supports parallelism on different stages of numerical simulations. Using this model, we develop parallel algorithms of numerical integration for dynamic problems and local stiffness matrices. For constructing and solving the systems of equations, we use the CUDA programming platform.
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The cosymmetric approach to the analysis of spatial structure of populations with amount of taxis
Computer Research and Modeling, 2016, v. 8, no. 4, pp. 661-671Views (last year): 2. Citations: 1 (RSCI).We consider a mathematical model describing the competition for a heterogeneous resource of two populations on a one-dimensional area. Distribution of populations is governed by diffusion and directed migration, species growth obeys to the logistic law. We study the corresponding problem of nonlinear parabolic equations with variable coefficients (function of a resource, parameters of growth, diffusion and migration). Approach on the theory the cosymmetric dynamic systems of V. Yudovich is applied to the analysis of population patterns. Conditions on parameters for which the problem under investigation has nontrivial cosymmetry are analytically derived. Numerical experiment is used to find an emergence of continuous family of steady states when cosymmetry takes place. The numerical scheme is based on the finite-difference discretization in space using the balance method and integration on time by Runge-Kutta method. Impact of diffusive and migration parameters on scenarios of distribution of populations is studied. In the vicinity of the line, corresponding to cosymmetry, neutral curves for diffusive parameters are calculated. We present the mappings with areas of diffusive parameters which correspond to scenarios of coexistence and extinction of species. For a number of migration parameters and resource functions with one and two maxima the analysis of possible scenarios is carried out. Particularly, we found the areas of parameters for which the survival of each specie is determined by initial conditions. It should be noted that dynamics may be nontrivial: after starting decrease in densities of both species the growth of only one population takes place whenever another specie decreases. The analysis has shown that areas of the diffusive parameters corresponding to various scenarios of population patterns are grouped near the cosymmetry lines. The derived mappings allow to explain, in particular, effect of a survival of population due to increasing of diffusive mobility in case of starvation.
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The Solver of Boltzmann equation on unstructured spatial grids
Computer Research and Modeling, 2019, v. 11, no. 3, pp. 427-447Views (last year): 13.The purpose of this work is to develop a universal computer program (solver) which solves kinetic Boltzmann equation for simulations of rarefied gas flows in complexly shaped devices. The structure of the solver is described in details. Its efficiency is demonstrated on an example of calculations of a modern many tubes Knudsen pump. The kinetic Boltzmann equation is solved by finite-difference method on discrete grid in spatial and velocity spaces. The differential advection operator is approximated by finite difference method. The calculation of the collision integral is based on the conservative projection method.
In the developed computational program the unstructured spatial mesh is generated using GMSH and may include prisms, tetrahedrons, hexahedrons and pyramids. The mesh is denser in areas of flow with large gradients of gas parameters. A three-dimensional velocity grid consists of cubic cells of equal volume.
A huge amount of calculations requires effective parallelization of the algorithm which is implemented in the program with the use of Message Passing Interface (MPI) technology. An information transfer from one node to another is implemented as a kind of boundary condition. As a result, every MPI node contains the information about only its part of the grid.
The main result of the work is presented in the graph of pressure difference in 2 reservoirs connected by a multitube Knudsen pump from Knudsen number. This characteristic of the Knudsen pump obtained by numerical methods shows the quality of the pump. Distributions of pressure, temperature and gas concentration in a steady state inside the pump and the reservoirs are presented as well.
The correctness of the solver is checked using two special test solutions of more simple boundary problems — test with temperature distribution between 2 planes with different temperatures and test with conservation of total gas mass.
The correctness of the obtained data for multitube Knudsen pump is checked using denser spatial and velocity grids, using more collisions in collision integral per time step.
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Numerical study of the dynamics of motion of a square body in a supersonic flow behind a shock wave
Computer Research and Modeling, 2022, v. 14, no. 4, pp. 755-766In a number of fundamental and practical problems, it is necessary to describe the dynamics of the motion of complexshaped particles in a high-speed gas flow. An example is the movement of coal particles behind the front of a strong shock wave during an explosion in a coal mine. The paper is devoted to numerical simulation of the dynamics of translational and rotational motion of a square-shaped body, as an example of a particle of a more complex shape than a round one, in a supersonic flow behind a passing shock wave. The formulation of the problem approximately corresponds to the experiments of Professor V. M. Boiko and Professor S. V. Poplavski (ITAM SB RAS).
Mathematical model is based on the two-dimensional Euler equations, which are solved in a region with varying boundaries. The defining system of equations is integrated using an explicit scheme and the Cartesian grid method which was developed and verified earlier. The computational algorithm at the time integration step includes: determining the step value, calculating the dynamics of the body movement (determining the force and moment acting on the body; determining the linear and angular velocities of the body; calculating the new coordinates of the body), calculating the gas parameters. To calculate numerical fluxes through the edges of the cell intersected by the boundaries of the body, we use a two-wave approximation for solving the Riemann problem and the Steger – Warming scheme.
The movement of a square with a side of 6 mm was initiated by the passage of a shock wave with a Mach number of 3,0 propagating in a flat channel 800 mm long and 60 mm wide. The channel was filled with air at low pressure. Different initial orientation of the square relative to the channel axis was considered. It is found that the initial position of the square with its side across the flow is less stable during its movement than the initial position with a diagonal across the flow. In this case, the calculated results qualitatively correspond to experimental observations. For the intermediate initial positions of a square, a typical mode of its motion is described, consisting of oscillations close to harmonic, turning into rotation with a constant average angular velocity. During the movement of the square, there is an average monotonous decrease in the distance between the center of mass and the center of pressure to zero.
Keywords: shock wave, Cartesian grid method, Euler equations, supersonic flow, square body, rotation. -
Modeling of gas mixture separation in a multistage micropump based on the solution of the Boltzmann equation
Computer Research and Modeling, 2024, v. 16, no. 6, pp. 1417-1432The paper simulates a mixture of gases in a multi-stage micro-pump and evaluates its effectiveness at separating the components of the mixture. A device in the form of a long channel with a series of transverse plates is considered. A temperature difference between the sides of the plates induces a radiometric gas flow within the device, and the differences in masses of the gases lead to differences in flow velocities and to the separation of the mixture. Modeling is based on the numerical solution of the Boltzmann kinetic equation, for which a splitting scheme is used, i. e., the advection equation and the relaxation problem are solved separately in alternation. The calculation of the collision integral is performed using the conservative projection method. This method ensures the strict fulfillment of the laws of conservation of mass, momentum, and energy, as well as the important asymptotic property of the equality of the integral of the Maxwell function to zero. Explicit first-order and second-order TVD-schemes are used to solve the advection equation. The calculations were performed for a neon-argon mixture using a model of solid spheres with real molecular diameters and masses. Software has been developed to allow calculations on personal computers and cluster systems. The use of parallelization leads to faster computation and constant time per iteration for devices of different sizes, enabling the modeling of large particle systems. It was found that the value of mixture separation, i. e. the ratio of densities at the ends of the device linearly depends on the number of cascades in the device, which makes it possible to estimate separation for multicascade systems, computer modeling of which is impossible. Flows and distributions of gas inside the device during its operation were analyzed. It was demonstrated that devices of this kind with a sufficiently large number of plates are suitable for the separation of gas mixtures, given that they have no moving parts and are quite simple in manufacture and less subject to wear.
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Numerical analyses of singularity in the integral equation of theory of liquids in the RISM approximation
Computer Research and Modeling, 2010, v. 2, no. 1, pp. 51-62Views (last year): 4.An approach to evaluation of a parametric portrait of integral equations of the theory of liquids in the RISM approximation was proposed. To obtain all associated solutions the continuation method was used. The equations reduced to a two-centered molecule model for symmetry reasons were deduced for molecular liquids. For molecular liquids, some equations were obtained which could be reduced, for symmetry reasons, to a two-center molecular model. To avoid critical points we changed the dependence of RISM-equations on reverse compressibility. The suggested method was used to perform numerical computations of methane reverse compressibility isotherms with three closures. No bifurcation of solutions was observed in the case of the partially linearized hypernetted chain closure. For other closures bifurcations of solutions were obtained and the model behavior nontypical for simple liquids was observed. In the case of Percus-Yevick closure nonphysical solutions were obtained at low temperature and density. Additional solution branch with a kink in the bifurcation point was obtained in the case of hypernetted chain closure at temperature above the critical point.
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Optimal control of the motion in an ideal fluid of a screw-shaped body with internal rotors
Computer Research and Modeling, 2017, v. 9, no. 5, pp. 741-759Views (last year): 12. Citations: 1 (RSCI).In this paper we consider the controlled motion of a helical body with three blades in an ideal fluid, which is executed by rotating three internal rotors. We set the problem of selecting control actions, which ensure the motion of the body near the predetermined trajectory. To determine controls that guarantee motion near the given curve, we propose methods based on the application of hybrid genetic algorithms (genetic algorithms with real encoding and with additional learning of the leader of the population by a gradient method) and artificial neural networks. The correctness of the operation of the proposed numerical methods is estimated using previously obtained differential equations, which define the law of changing the control actions for the predetermined trajectory.
In the approach based on hybrid genetic algorithms, the initial problem of minimizing the integral functional reduces to minimizing the function of many variables. The given time interval is broken up into small elements, on each of which the control actions are approximated by Lagrangian polynomials of order 2 and 3. When appropriately adjusted, the hybrid genetic algorithms reproduce a solution close to exact. However, the cost of calculation of 1 second of the physical process is about 300 seconds of processor time.
To increase the speed of calculation of control actions, we propose an algorithm based on artificial neural networks. As the input signal the neural network takes the components of the required displacement vector. The node values of the Lagrangian polynomials which approximately describe the control actions return as output signals . The neural network is taught by the well-known back-propagation method. The learning sample is generated using the approach based on hybrid genetic algorithms. The calculation of 1 second of the physical process by means of the neural network requires about 0.004 seconds of processor time, that is, 6 orders faster than the hybrid genetic algorithm. The control calculated by means of the artificial neural network differs from exact control. However, in spite of this difference, it ensures that the predetermined trajectory is followed exactly.
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Numerical simulation of ice accretion in FlowVision software
Computer Research and Modeling, 2020, v. 12, no. 1, pp. 83-96Certifying a transport airplane for the flights under icing conditions requires calculations aimed at definition of the dimensions and shapes of the ice bodies formed on the airplane surfaces. Up to date, software developed in Russia for simulation of ice accretion, which would be authorized by Russian certifying supervisory authority, is absent. This paper describes methodology IceVision recently developed in Russia on the basis of software FlowVision for calculations of ice accretion on airplane surfaces.
The main difference of methodology IceVision from the other approaches, known from literature, consists in using technology Volume Of Fluid (VOF — volume of fluid in cell) for tracking the surface of growing ice body. The methodology assumes solving a time-depended problem of continuous grows of ice body in the Euler formulation. The ice is explicitly present in the computational domain. The energy equation is integrated inside the ice body. In the other approaches, changing the ice shape is taken into account by means of modifying the aerodynamic surface and using Lagrangian mesh. In doing so, the heat transfer into ice is allowed for by an empirical model.
The implemented mathematical model provides capability to simulate formation of rime (dry) and glaze (wet) ice. It automatically identifies zones of rime and glaze ice. In a rime (dry) ice zone, the temperature of the contact surface between air and ice is calculated with account of ice sublimation and heat conduction inside the ice. In a glaze (wet) ice zone, the flow of the water film over the ice surface is allowed for. The film freezes due to evaporation and heat transfer inside the air and the ice. Methodology IceVision allows for separation of the film. For simulation of the two-phase flow of the air and droplets, a multi-speed model is used within the Euler approach. Methodology IceVision allows for size distribution of droplets. The computational algorithm takes account of essentially different time scales for the physical processes proceeding in the course of ice accretion, viz., air-droplets flow, water flow, and ice growth. Numerical solutions of validation test problems demonstrate efficiency of methodology IceVision and reliability of FlowVision results.
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Parallel embedded discrete fracture method for flows in fractured porous media
Computer Research and Modeling, 2021, v. 13, no. 4, pp. 735-745In this work, parallel method for solving single-phase flow problems in a fractured porous media is considered. Method is based on the representation of fractures by surfaces embedded into the computational mesh, and known as the embedded discrete fracture model. Porous medium and fractures are represented as two independent continua within the model framework. A distinctive feature of the considered approach is that fractures do not modify the computational grid, while an additional degree of freedom is introduced for each cell intersected by the fracture. Discretization of fluxes between fractures and porous medium continua uses the pre-calculated intersection characteristics of fracture surfaces with a three-dimensional computational grid. The discretization of fluxes inside a porous medium does not depend on flows between continua. This allows the model to be integrated into existing multiphase flow simulators in porous reservoirs, while accurately describing flow behaviour near fractures.
Previously, the author proposed monotonic modifications of the model using nonlinear finite-volume schemes for the discretization of the fluxes inside the porous medium: a monotonic two-point scheme or a compact multi-point scheme with a discrete maximum principle. It was proved that the discrete solution of the obtained nonlinear problem preserves non-negativity or satisfies the discrete maximum principle, depending on the choice of the discretization scheme.
This work is a continuation of previous studies. The previously proposed monotonic modification of the model was parallelized using the INMOST open-source software platform for parallel numerical modelling. We used such features of the INMOST as a balanced grid distribution among processors, scalable methods for solving sparse distributed systems of linear equations, and others. Parallel efficiency was demonstrated experimentally.
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Modeling the response of polycrystalline ferroelectrics to high-intensity electric and mechanical fields
Computer Research and Modeling, 2022, v. 14, no. 1, pp. 93-113A mathematical model describing the irreversible processes of polarization and deformation of polycrystalline ferroelectrics in external electric and mechanical fields of high intensity is presented, as a result of which the internal structure changes and the properties of the material change. Irreversible phenomena are modeled in a three-dimensional setting for the case of simultaneous action of an electric field and mechanical stresses. The object of the research is a representative volume in which the residual phenomena in the form of the induced and irreversible parts of the polarization vector and the strain tensor are investigated. The main task of modeling is to construct constitutive relations connecting the polarization vector and strain tensor, on the one hand, and the electric field vector and mechanical stress tensor, on the other hand. A general case is considered when the direction of the electric field may not coincide with any of the main directions of the tensor of mechanical stresses. For reversible components, the constitutive relations are constructed in the form of linear tensor equations, in which the modules of elasticity and dielectric permeability depend on the residual strain, and the piezoelectric modules depend on the residual polarization. The constitutive relations for irreversible parts are constructed in several stages. First, an auxiliary model was constructed for the ideal or unhysteretic case, when all vectors of spontaneous polarization can rotate in the fields of external forces without mutual influence on each other. A numerical method is proposed for calculating the resulting values of the maximum possible polarization and deformation values of an ideal case in the form of surface integrals over the unit sphere with the distribution density obtained from the statistical Boltzmann law. After that the estimates of the energy costs required for breaking down the mechanisms holding the domain walls are made, and the work of external fields in real and ideal cases is calculated. On the basis of this, the energy balance was derived and the constitutive relations for irreversible components in the form of equations in differentials were obtained. A scheme for the numerical solution of these equations has been developed to determine the current values of the irreversible required characteristics in the given electrical and mechanical fields. For cyclic loads, dielectric, deformation and piezoelectric hysteresis curves are plotted.
The developed model can be implanted into a finite element complex for calculating inhomogeneous residual polarization and deformation fields with subsequent determination of the physical modules of inhomogeneously polarized ceramics as a locally anisotropic body.
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