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Direct multiplicative methods for sparse matrices. Unbalanced linear systems.
Computer Research and Modeling, 2016, v. 8, no. 6, pp. 833-860Views (last year): 20. Citations: 2 (RSCI).Small practical value of many numerical methods for solving single-ended systems of linear equations with ill-conditioned matrices due to the fact that these methods in the practice behave quite differently than in the case of precise calculations. Historically, sustainability is not enough attention was given, unlike in numerical algebra ‘medium-sized’, and emphasis is given to solving the problems of maximal order in data capabilities of the computer, including the expense of some loss of accuracy. Therefore, the main objects of study is the most appropriate storage of information contained in the sparse matrix; maintaining the highest degree of rarefaction at all stages of the computational process. Thus, the development of efficient numerical methods for solving unstable systems refers to the actual problems of computational mathematics.
In this paper, the approach to the construction of numerically stable direct multiplier methods for solving systems of linear equations, taking into account sparseness of matrices, presented in packaged form. The advantage of the approach consists in minimization of filling the main lines of the multipliers without compromising accuracy of the results and changes in the position of the next processed row of the matrix are made that allows you to use static data storage formats. The storage format of sparse matrices has been studied and the advantage of this format consists in possibility of parallel execution any matrix operations without unboxing, which significantly reduces the execution time and memory footprint.
Direct multiplier methods for solving systems of linear equations are best suited for solving problems of large size on a computer — sparse matrix systems allow you to get multipliers, the main row of which is also sparse, and the operation of multiplication of a vector-row of the multiplier according to the complexity proportional to the number of nonzero elements of this multiplier.
As a direct continuation of this work is proposed in the basis for constructing a direct multiplier algorithm of linear programming to put a modification of the direct multiplier algorithm for solving systems of linear equations based on integration of technique of linear programming for methods to select the host item. Direct multiplicative methods of linear programming are best suited for the construction of a direct multiplicative algorithm set the direction of descent Newton methods in unconstrained optimization by integrating one of the existing design techniques significantly positive definite matrix of the second derivatives.
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Cellular automata methods in mathematical physics classical problems solving on hexagonal grid. Part 2
Computer Research and Modeling, 2017, v. 9, no. 4, pp. 547-566Views (last year): 6.The second part of paper is devoted to final study of three classic partial differential equations (Laplace, Diffusion and Wave) solution using simple numerical methods in terms of Cellular Automata. Specificity of this solution has been shown by different examples, which are related to the hexagonal grid. Also the next statements that are mentioned in the first part have been proved: the matter conservation law and the offensive effect of excessive hexagonal symmetry.
From the point of CA view diffusion equation is the most important. While solving of diffusion equation at the infinite time interval we can find solution of boundary value problem of Laplace equation and if we introduce vector-variable we will solve wave equation (at least, for scalar). The critical requirement for the sampling of the boundary conditions for CA-cells has been shown during the solving of problem of circular membrane vibrations with Neumann boundary conditions. CA-calculations using the simple scheme and Margolus rotary-block mechanism were compared for the quasione-dimensional problem “diffusion in the half-space”. During the solving of mixed task of circular membrane vibration with the fixed ends in a classical case it has been shown that the simultaneous application of the Crank–Nicholson method and taking into account of the second-order terms is allowed to avoid the effect of excessive hexagonal symmetry that was studied for a simple scheme.
By the example of the centrally symmetric Neumann problem a new method of spatial derivatives introducing into the postfix CA procedure, which is reflecting the time derivatives (on the base of the continuity equation) was demonstrated. The value of the constant that is related to these derivatives has been empirically found in the case of central symmetry. The low rate of convergence and accuracy that limited within the boundaries of the sample, in contrary to the formal precision of the method (4-th order), prevents the using of the CAmethods for such problems. We recommend using multigrid method. During the solving of the quasi-diffusion equations (two-dimensional CA) it was showing that the rotary-block mechanism of CA (Margolus mechanism) is more effective than simple CA.
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On the convergence of the implicit iterative line-by-line recurrence method for solving difference elliptical equations
Computer Research and Modeling, 2017, v. 9, no. 6, pp. 857-880Views (last year): 15. Citations: 1 (RSCI).In the article a theory of the implicit iterative line-by-line recurrence method for solving the systems of finite-difference equations which arise as a result of approximation of the two-dimensional elliptic differential equations on a regular grid is stated. On the one hand, the high effectiveness of the method has confirmed in practice. Some complex test problems, as well as several problems of fluid flow and heat transfer of a viscous incompressible liquid, have solved with its use. On the other hand, the theoretical provisions that explain the high convergence rate of the method and its stability are not yet presented in the literature. This fact is the reason for the present investigation. In the paper, the procedure of equivalent and approximate transformations of the initial system of linear algebraic equations (SLAE) is described in detail. The transformations are presented in a matrix-vector form, as well as in the form of the computational formulas of the method. The key points of the transformations are illustrated by schemes of changing of the difference stencils that correspond to the transformed equations. The canonical form of the method is the goal of the transformation procedure. The correctness of the method follows from the canonical form in the case of the solution convergence. The estimation of norms of the matrix operators is carried out on the basis of analysis of structures and element sets of the corresponding matrices. As a result, the convergence of the method is proved for arbitrary initial vectors of the solution of the problem.
The norm of the transition matrix operator is estimated in the special case of weak restrictions on a desired solution. It is shown, that the value of this norm decreases proportionally to the second power (or third degree, it depends on the version of the method) of the grid step of the problem solution area in the case of transition matrix order increases. The necessary condition of the method stability is obtained by means of simple estimates of the vector of an approximate solution. Also, the estimate in order of magnitude of the optimum iterative compensation parameter is given. Theoretical conclusions are illustrated by using the solutions of the test problems. It is shown, that the number of the iterations required to achieve a given accuracy of the solution decreases if a grid size of the solution area increases. It is also demonstrated that if the weak restrictions on solution are violated in the choice of the initial approximation of the solution, then the rate of convergence of the method decreases essentially in full accordance with the deduced theoretical results.
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Modern methods of mathematical modeling of blood flow using reduced order methods
Computer Research and Modeling, 2018, v. 10, no. 5, pp. 581-604Views (last year): 62. Citations: 2 (RSCI).The study of the physiological and pathophysiological processes in the cardiovascular system is one of the important contemporary issues, which is addressed in many works. In this work, several approaches to the mathematical modelling of the blood flow are considered. They are based on the spatial order reduction and/or use a steady-state approach. Attention is paid to the discussion of the assumptions and suggestions, which are limiting the scope of such models. Some typical mathematical formulations are considered together with the brief review of their numerical implementation. In the first part, we discuss the models, which are based on the full spatial order reduction and/or use a steady-state approach. One of the most popular approaches exploits the analogy between the flow of the viscous fluid in the elastic tubes and the current in the electrical circuit. Such models can be used as an individual tool. They also used for the formulation of the boundary conditions in the models using one dimensional (1D) and three dimensional (3D) spatial coordinates. The use of the dynamical compartment models allows describing haemodynamics over an extended period (by order of tens of cardiac cycles and more). Then, the steady-state models are considered. They may use either total spatial reduction or two dimensional (2D) spatial coordinates. This approach is used for simulation the blood flow in the region of microcirculation. In the second part, we discuss the models, which are based on the spatial order reduction to the 1D coordinate. The models of this type require relatively small computational power relative to the 3D models. Within the scope of this approach, it is also possible to include all large vessels of the organism. The 1D models allow simulation of the haemodynamic parameters in every vessel, which is included in the model network. The structure and the parameters of such a network can be set according to the literature data. It also exists methods of medical data segmentation. The 1D models may be derived from the 3D Navier – Stokes equations either by asymptotic analysis or by integrating them over a volume. The major assumptions are symmetric flow and constant shape of the velocity profile over a cross-section. These assumptions are somewhat restrictive and arguable. Some of the current works paying attention to the 1D model’s validation, to the comparing different 1D models and the comparing 1D models with clinical data. The obtained results reveal acceptable accuracy. It allows concluding, that the 1D approach can be used in medical applications. 1D models allow describing several dynamical processes, such as pulse wave propagation, Korotkov’s tones. Some physiological conditions may be included in the 1D models: gravity force, muscles contraction force, regulation and autoregulation.
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The global rate of convergence for optimal tensor methods in smooth convex optimization
Computer Research and Modeling, 2018, v. 10, no. 6, pp. 737-753Views (last year): 75.In this work we consider Monteiro – Svaiter accelerated hybrid proximal extragradient (A-HPE) framework and accelerated Newton proximal extragradient (A-NPE) framework. The last framework contains an optimal method for rather smooth convex optimization problems with second-order oracle. We generalize A-NPE framework for higher order derivative oracle (schemes). We replace Newton’s type step in A-NPE that was used for auxiliary problem by Newton’s regularized (tensor) type step (Yu. Nesterov, 2018). Moreover we generalize large step A-HPE/A-NPE framework by replacing Monteiro – Svaiter’s large step condition so that this framework could work for high-order schemes. The main contribution of the paper is as follows: we propose optimal highorder methods for convex optimization problems. As far as we know for that moment there exist only zero, first and second order optimal methods that work according to the lower bounds. For higher order schemes there exists a gap between the lower bounds (Arjevani, Shamir, Shiff, 2017) and existing high-order (tensor) methods (Nesterov – Polyak, 2006; Yu.Nesterov, 2008; M. Baes, 2009; Yu.Nesterov, 2018). Asymptotically the ratio of the rates of convergences for the best existing methods and lower bounds is about 1.5. In this work we eliminate this gap and show that lower bounds are tight. We also consider rather smooth strongly convex optimization problems and show how to generalize the proposed methods to this case. The basic idea is to use restart technique until iteration sequence reach the region of quadratic convergence of Newton method and then use Newton method. One can show that the considered method converges with optimal rates up to a logarithmic factor. Note, that proposed in this work technique can be generalized in the case when we can’t solve auxiliary problem exactly, moreover we can’t even calculate the derivatives of the functional exactly. Moreover, the proposed technique can be generalized to the composite optimization problems and in particular to the constraint convex optimization problems. We also formulate a list of open questions that arise around the main result of this paper (optimal universal method of high order e.t.c.).
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Global limit cycle bifurcations of a polynomial Euler–Lagrange–Liénard system
Computer Research and Modeling, 2020, v. 12, no. 4, pp. 693-705In this paper, using our bifurcation-geometric approach, we study global dynamics and solve the problem of the maximum number and distribution of limit cycles (self-oscillating regimes corresponding to states of dynamical equilibrium) in a planar polynomial mechanical system of the Euler–Lagrange–Liйnard type. Such systems are also used to model electrical, ecological, biomedical and other systems, which greatly facilitates the study of the corresponding real processes and systems with complex internal dynamics. They are used, in particular, in mechanical systems with damping and stiffness. There are a number of examples of technical systems that are described using quadratic damping in second-order dynamical models. In robotics, for example, quadratic damping appears in direct-coupled control and in nonlinear devices, such as variable impedance (resistance) actuators. Variable impedance actuators are of particular interest to collaborative robotics. To study the character and location of singular points in the phase plane of the Euler–Lagrange–Liйnard polynomial system, we use our method the meaning of which is to obtain the simplest (well-known) system by vanishing some parameters (usually, field rotation parameters) of the original system and then to enter sequentially these parameters studying the dynamics of singular points in the phase plane. To study the singular points of the system, we use the classical Poincarй index theorems, as well as our original geometric approach based on the application of the Erugin twoisocline method which is especially effective in the study of infinite singularities. Using the obtained information on the singular points and applying canonical systems with field rotation parameters, as well as using the geometric properties of the spirals filling the internal and external regions of the limit cycles and applying our geometric approach to qualitative analysis, we study limit cycle bifurcations of the system under consideration.
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Numerical solution to a two-dimensional nonlinear heat equation using radial basis functions
Computer Research and Modeling, 2022, v. 14, no. 1, pp. 9-22The paper presents a numerical solution to the heat wave motion problem for a degenerate second-order nonlinear parabolic equation with a source term. The nonlinearity is conditioned by the power dependence of the heat conduction coefficient on temperature. The problem for the case of two spatial variables is considered with the boundary condition specifying the heat wave motion law. A new solution algorithm based on an expansion in radial basis functions and the boundary element method is proposed. The solution is constructed stepwise in time with finite difference time approximation. At each time step, a boundary value problem for the Poisson equation corresponding to the original equation at a fixed time is solved. The solution to this problem is constructed iteratively as the sum of a particular solution to the nonhomogeneous equation and a solution to the corresponding homogeneous equation satisfying the boundary conditions. The homogeneous equation is solved by the boundary element method. The particular solution is sought by the collocation method using inhomogeneity expansion in radial basis functions. The calculation algorithm is optimized by parallelizing the computations. The algorithm is implemented as a program written in the C++ language. The parallel computations are organized by using the OpenCL standard, and this allows one to run the same parallel code either on multi-core CPUs or on graphic CPUs. Test cases are solved to evaluate the effectiveness of the proposed solution method and the correctness of the developed computational technique. The calculation results are compared with known exact solutions, as well as with the results we obtained earlier. The accuracy of the solutions and the calculation time are estimated. The effectiveness of using various systems of radial basis functions to solve the problems under study is analyzed. The most suitable system of functions is selected. The implemented complex computational experiment shows higher calculation accuracy of the proposed new algorithm than that of the previously developed one.
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Optimal threshold selection algorithms for multi-label classification: property study
Computer Research and Modeling, 2022, v. 14, no. 6, pp. 1221-1238Multi-label classification models arise in various areas of life, which is explained by an increasing amount of information that requires prompt analysis. One of the mathematical methods for solving this problem is a plug-in approach, at the first stage of which, for each class, a certain ranking function is built, ordering all objects in some way, and at the second stage, the optimal thresholds are selected, the objects on one side of which are assigned to the current class, and on the other — to the other. Thresholds are chosen to maximize the target quality measure. The algorithms which properties are investigated in this article are devoted to the second stage of the plug-in approach which is the choice of the optimal threshold vector. This step becomes non-trivial if the F-measure of average precision and recall is used as the target quality assessment since it does not allow independent threshold optimization in each class. In problems of extreme multi-label classification, the number of classes can reach hundreds of thousands, so the original optimization problem is reduced to the problem of searching a fixed point of a specially introduced transformation \boldsymbol V, defined on a unit square on the plane of average precision P and recall R. Using this transformation, two algorithms are proposed for optimization: the F-measure linearization method and the method of \boldsymbol V domain analysis. The properties of algorithms are studied when applied to multi-label classification data sets of various sizes and origin, in particular, the dependence of the error on the number of classes, on the F-measure parameter, and on the internal parameters of methods under study. The peculiarity of both algorithms work when used for problems with the domain of \boldsymbol V, containing large linear boundaries, was found. In case when the optimal point is located in the vicinity of these boundaries, the errors of both methods do not decrease with an increase in the number of classes. In this case, the linearization method quite accurately determines the argument of the optimal point, while the method of \boldsymbol V domain analysis — the polar radius.
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Correctness of task family with nonclassical boundary conditions
Computer Research and Modeling, 2009, v. 1, no. 2, pp. 139-146Views (last year): 2.A boundary value problem for partial differential equation with nonlocal boundary relations of special type is resolved by means of a slight modification of the separation of variables method. Ordinal differential operator of the second order subject to boundary conditions of the main problem is not self-adjoint. The system of eigenfunctions generated by the operator has no basis property in L2[0,1] space. A special system of functions is proposed to expand the solution of the boundary value problem.
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