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Effects of the heart contractility and its vascular load on the heart rate in athlets
Computer Research and Modeling, 2017, v. 9, no. 2, pp. 323-329Views (last year): 5. Citations: 1 (RSCI).Heart rate (HR) is the most affordable indicator for measuring. In order to control the individual response to physical exercises of different load types heart rate is measured when the athletes perform different types of muscular work (strength machines, various types of training and competitive exercises). The magnitude of heart rate and its dynamics during muscular work and recovery can be objectively judged on the functional status of the cardiovascular system of an athlete, the level of its individual physical performance, as well as an adaptive response to a particular exercise. However, the heart rate is not an independent determinant of the physical condition of an athlete. HR size is formed by the interaction of the basic physiological mechanisms underlying cardiac hemodynamic ejection mode. Heart rate depends on one hand, on contractility of the heart, the venous return, the volumes of the atria and ventricles of the heart and from vascular heart load, the main components of which are elastic and peripheral resistance of the arterial system on the other hand. The values of arterial system vascular resistances depend on the power of muscular work and its duration. HR sensitivity to changes in heart load and vascular contraction was determined in athletes by pair regression analysis simultaneously recorded heart rate data, and peripheral $(R)$ and elastic $(E_a)$ resistance (heart vascular load), and the power $(W)$ of heartbeats (cardiac contractility). The coefficients of sensitivity and pair correlation between heart rate indicators and vascular load and contractility of left ventricle of the heart were determined in athletes at rest and during the muscular work on the cycle ergometer. It is shown that increase in both ergometer power load and heart rate is accompanied by the increase of correlation coefficients and coefficients of the heart rate sensitivity to $R$, $E_a$ and $W$.
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Features of the DNA kink motion in the asynchronous switching on and off of the constant and periodic fields
Computer Research and Modeling, 2018, v. 10, no. 4, pp. 545-558Views (last year): 29. Citations: 1 (RSCI).Investigation of the influence of external fields on living systems is one of the most interesting and rapidly developing areas of modern biophysics. However, the mechanisms of such an impact are still not entirely clear. One approach to the study of this issue is associated with modeling the interaction of external fields with internal mobility of biological objects. In this paper, this approach is used to study the effect of external fields on the motion of local conformational distortions — kinks, in the DNA molecule. Realizing and taking into account that on the whole this task is closely connected with the problem of the mechanisms of regulation of vital processes of cells and cellular systems, we set the problem — to investigate the physical mechanisms regulating the motion of kinks and also to answer the question whether permanent and periodic fields can play the role of regulators of this movement. The paper considers the most general case, when constant and periodic fields are switching on and off asynchronously. Three variants of asynchronous switching on/off are studied in detail. In the first variant, the time intervals (or diapasons) of the actions of the constant and periodic fields do not overlap, in the second — overlap, and in the third — the intervals are putting in each other. The calculations were performed for the sequence of plasmid pTTQ18. The kink motion was modeled by the McLaughlin–Scott equation, and the coefficients of the equation were calculated in a quasi-homogeneous approximation. Numerical experiments showed that constant and periodic fields exert a significant influence on the character of the kink motion and regulate it. So the switching on of a constant field leads to a rapid increase of the kink velocity and to the establishment of a stationary velocity of motion, and the switching on of a periodic field leads to the steady oscillations of the kink with the frequency of the external periodic field. It is shown that the behavior of the kink depends on the mutual arrangement of the diapasons of the action of the external fields. As it turned out, events occurring in one of the two diapasons can affect the events in the other diapason, even when the diapasons are sufficiently far apart. It is shown that the overlapping of the diapasons of action of the constant and periodic fields leads to a significant increase in the path traversed by the kink to a complete stop. Maximal growth of the path is observed when one diapason is putting in each other. In conclusion, the question of how the obtained model results could be related to the most important task of biology — the problem of the mechanisms of regulation of the processes of vital activity of cells and cellular systems is discussed.
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Boundary conditions for lattice Boltzmann equations in applications to hemodynamics
Computer Research and Modeling, 2020, v. 12, no. 4, pp. 865-882We consider a one-dimensional three velocity kinetic lattice Boltzmann model, which represents a secondorder difference scheme for hydrodynamic equations. In the framework of kinetic theory this system describes the propagation and interaction of three types of particles. It has been shown previously that the lattice Boltzmann model with external virtual force is equivalent at the hydrodynamic limit to the one-dimensional hemodynamic equations for elastic vessels, this equivalence can be achieved with use of the Chapman – Enskog expansion. The external force in the model is responsible for the ability to adjust the functional dependence between the lumen area of the vessel and the pressure applied to the wall of the vessel under consideration. Thus, the form of the external force allows to model various elastic properties of the vessels. In the present paper the physiological boundary conditions are considered at the inlets and outlets of the arterial network in terms of the lattice Boltzmann variables. We consider the following boundary conditions: for pressure and blood flow at the inlet of the vascular network, boundary conditions for pressure and blood flow for the vessel bifurcations, wave reflection conditions (correspond to complete occlusion of the vessel) and wave absorption at the ends of the vessels (these conditions correspond to the passage of the wave without distortion), as well as RCR-type conditions, which are similar to electrical circuits and consist of two resistors (corresponding to the impedance of the vessel, at the end of which the boundary conditions are set and the friction forces in microcirculatory bed) and one capacitor (describing the elastic properties of arterioles). The numerical simulations were performed: the propagation of blood in a network of three vessels was considered, the boundary conditions for the blood flow were set at the entrance of the network, RCR boundary conditions were stated at the ends of the network. The solutions to lattice Boltzmann model are compared with the benchmark solutions (based on numerical calculations for second-order McCormack difference scheme without viscous terms), it is shown that the both approaches give very similar results.
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A dynamic analysis of a prey – predator – superpredator system: a family of equilibria and its destruction
Computer Research and Modeling, 2023, v. 15, no. 6, pp. 1601-1615The paper investigates the dynamics of a finite-dimensional model describing the interaction of three populations: prey $x(t)$, its consuming predator $y(t)$, and a superpredator $z(t)$ that feeds on both species. Mathematically, the problem is formulated as a system of nonlinear first-order differential equations with the following right-hand side: $[x(1-x)-(y+z)g;\,\eta_1^{}yg-d_1^{}f-\mu_1^{}y;\,\eta_2^{}zg+d_2^{}f-\mu_2^{}z]$, where $\eta_j^{}$, $d_j^{}$, $\mu_j^{}$ ($j=1,\,2$) are positive coefficients. The considered model belongs to the class of cosymmetric dynamical systems under the Lotka\,--\,Volterra functional response $g=x$, $f=yz$, and two parameter constraints: $\mu_2^{}=d_2^{}\left(1+\frac{\mu_1^{}}{d_1^{}}\right)$, $\eta_2^{}=d_2^{}\left(1+\frac{\eta_1^{}}{d_1^{}}\right)$. In this case, a family of equilibria is being of a straight line in phase space. We have analyzed the stability of the equilibria from the family and isolated equilibria. Maps of stationary solutions and limit cycles have been constructed. The breakdown of the family is studied by violating the cosymmetry conditions and using the Holling model $g(x)=\frac x{1+b_1^{}x}$ and the Beddington–DeAngelis model $f(y,\,z)=\frac{yz}{1+b_2^{}y+b_3^{}z}$. To achieve this, the apparatus of Yudovich's theory of cosymmetry is applied, including the computation of cosymmetric defects and selective functions. Through numerical experimentation, invasive scenarios have been analyzed, encompassing the introduction of a superpredator into the predator-prey system, the elimination of the predator, or the superpredator.
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Modeling the indirect impact of rhinoceros beetle control on red palm weevils in coconut plantations
Computer Research and Modeling, 2025, v. 17, no. 4, pp. 737-752In this paper, a mathematical model is developed and analyzed to assess the indirect impact of controlling rhinoceros beetles on red palm weevil populations in coconut plantations. The model consists of a system of six non-linear ordinary differential equations (ODEs), capturing the interactions among healthy and infected coconut trees, rhinoceros beetles, red palm weevils, and the oryctes virus. The model ensures biological feasibility through positivity and boundedness analysis. The basic reproduction number $R_0$ is derived using the next-generation matrix method. Both local and global stability of the equilibrium points are analyzed to determine conditions for pest persistence or eradication. Sensitivity analysis identifies the most influential parameters for pest management. Numerical simulations reveal that by effectively controlling the rhinoceros beetle population particularly through infection with the oryctes virus, the spread of the red palm weevil can also be suppressed. This indirect control mechanism helps to protect the coconut tree population more efficiently and supports sustainable pest management in coconut plantations.
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Development of a hybrid simulation model of the assembly shop
Computer Research and Modeling, 2023, v. 15, no. 5, pp. 1359-1379In the presented work, a hybrid optimal simulation model of an assembly shop in the AnyLogic environment has been developed, which allows you to select the parameters of production systems. To build a hybrid model of the investigative approach, discrete-event modeling and aggressive modeling are combined into a single model with an integrating interaction. Within the framework of this work, a mechanism for the development of a production system consisting of several participants-agents is described. An obvious agent corresponds to a class in which a set of agent parameters is specified. In the simulation model, three main groups of operations performed sequentially were taken into account, and the logic for working with rejected sets was determined. The product assembly process is a process that occurs in a multi-phase open-loop system of redundant service with waiting. There are also signs of a closed system — scrap flows for reprocessing. When creating a distribution system in the segment, it is mandatory to use control over the execution of requests in a FIFO queue. For the functional assessment of the production system, the simulation model includes several functional functions that describe the number of finished products, the average time of preparation of products, the number and percentage of rejects, the simulation result for the study, as well as functional variables in which the calculated utilization factors will be used. A series of modeling experiments were carried out in order to study the behavior of the agents of the system in terms of the overall performance indicators of the production system. During the experiment, it was found that the indicator of the average preparation time of the product is greatly influenced by such parameters as: the average speed of the set of products, the average time to complete operations. At a given limitation interval, we managed to select a set of parameters that managed to achieve the largest possible operation of the assembly line. This experiment implements the basic principle of agent-based modeling — decentralized agents make a personal contribution and affect the operation of the entire simulated system as a whole. As a result of the experiments, thanks to the selection of a large set of parameters, it was possible to achieve high performance indicators of the assembly shop, namely: to increase the productivity indicator by 60%; reduce the average assembly time of products by 38%.
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Pattern formation of a three-species predator – prey model with prey-taxis and omnivorous predator
Computer Research and Modeling, 2023, v. 15, no. 6, pp. 1617-1634The spatiotemporal dynamics of a three-component model for food web is considered. The model describes the interactions among resource, prey and predator that consumes both species. In a previous work, the author analyzed the model without taking into account spatial heterogeneity. This study continues the model study of the community considering the diffusion of individuals, as well as directed movements of the predator. It is assumed that the predator responds to the spatial change in the resource and prey density by occupying areas where species density is higher or avoiding them. Directed predator movement is described by the advection term, where velocity is proportional to the gradient of resource and prey density. The system is considered on a one-dimensional domain with zero-flux conditions as boundary ones. The spatiotemporal dynamics produced by model is determined by the system stability in the vicinity of stationary homogeneous state with respect to small inhomogeneous perturbations. The paper analyzes the possibility of wave instability leading to the emergence of autowaves and Turing instability, as a result of which stationary patterns are formed. Sufficient conditions for the existence of both types of instability are obtained. The influence of local kinetic parameters on the spatial structure formation was analyzed. It was shown that only Turing instability is possible when taxis on the resource is positive, but with a negative taxis, both types of instability are possible. The numerical solution of the system was found by using method of lines (MOL) with the numerical integration of ODE system by means of splitting techniques. The spatiotemporal dynamics of the system is presented in several variants, realizing one of the instability types. In the case of a positive taxis on the prey, both autowave and stationary structures are formed in smaller regions, with an increase in the region size, Turing structures are not formed. For negative taxis on the prey, stationary patterns is observed in both regions, while periodic structures appear only in larger areas.
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A survey on the application of large language models in software engineering
Computer Research and Modeling, 2024, v. 16, no. 7, pp. 1715-1726Large Language Models (LLMs) are transforming software engineering by bridging the gap between natural language and programming languages. These models have revolutionized communication within development teams and the Software Development Life Cycle (SDLC) by enabling developers to interact with code using natural language, thereby improving workflow efficiency. This survey examines the impact of LLMs across various stages of the SDLC, including requirement gathering, system design, coding, debugging, testing, and documentation. LLMs have proven to be particularly useful in automating repetitive tasks such as code generation, refactoring, and bug detection, thus reducing manual effort and accelerating the development process. The integration of LLMs into the development process offers several advantages, including the automation of error correction, enhanced collaboration, and the ability to generate high-quality, functional code based on natural language input. Additionally, LLMs assist developers in understanding and implementing complex software requirements and design patterns. This paper also discusses the evolution of LLMs from simple code completion tools to sophisticated models capable of performing high-level software engineering tasks. However, despite their benefits, there are challenges associated with LLM adoption, such as issues related to model accuracy, interpretability, and potential biases. These limitations must be addressed to ensure the reliable deployment of LLMs in production environments. The paper concludes by identifying key areas for future research, including improving the adaptability of LLMs to specific software domains, enhancing their contextual understanding, and refining their capabilities to generate semantically accurate and efficient code. This survey provides valuable insights into the evolving role of LLMs in software engineering, offering a foundation for further exploration and practical implementation.
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Mathematical modeling of phase transitions during collective interaction of agents in a common thermal field
Computer Research and Modeling, 2025, v. 17, no. 5, pp. 1005-1028Collective behavior can serve as a mechanism of thermoregulation and play a key role in the joint survival of a group of organisms. In higher animals, such phenomena are usually the subject of study of biology since sudden transitions to collective behavior are difficult to differentiate from the psychological and social adaptation of animals. However, in this paper, we indicate several important examples when a flock of higher animals demonstrates phase transitions similar to known phenomena in liquids and gases. This issue can also be studied experimentally within the framework of synthetic systems consisting of self-propelled robots that act according to a certain given algorithm. Generalizing both of these cases, we consider the problem of phase transitions in a dense group of interacting selfpropelled agents. Within the framework of microscopic theory, we propose a mathematical model of the phenomenon, in which agents are represented as bodies interacting with each other in accordance with an effective potential of a special type, expressing the desire of agents to move in the direction of the gradient of the joint thermal field. We show that the number of agents in the group, the group power, is the control parameter of the problem. A discrete model with individual dynamics of agents reproduces most of the phenomena observed both in natural flocks of higher animals engaged in collective thermoregulation and in synthetic complex systems. A first-order phase transition is observed, which symbolizes a change in the aggregate state in a group of agents. One observes the self-assembly of the initial weakly structured mass of agents into dense quasi-crystalline structures. We demonstrate also that, with an increase in the group power, a second-order phase transition in the form of thermal convection can occur. It manifests in a sudden liquefaction of the group and a transition to vortex motion, which ensures more efficient energy consumption in the case of a synthetic system of interacting robots and the collective survival of all individuals in the case of natural animal flocks.With an increase in the group power, secondary bifurcations occur, the vortex structure in agent medium becomes more complicated.
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Features of social interactions: the basic model
Computer Research and Modeling, 2024, v. 16, no. 5, pp. 1323-1335The paper presents the results of research on the creation of a mathematical model of moral choice based on the development of the approach proposed by V. A. Lefebvre. Unlike V. A. Lefebvre, who considered a very speculative situation of a subject’s moral choice between abstract “good” and “evil” under pressure from the outside world, taking into account the subjective perception of this pressure by the subject, our study considers a more mundane and practically significant situation. The case is considered when the subject, when making decisions, is guided by his individual perception of the outside world (which may be distorted, for example, due to external purposeful informational influence on the subject and manipulation of his consciousness), and “good” and “evil” are not abstract, but are conditioned by a value system adopted in a particular society under consideration and tied to a specific ideology/religion, which may be different for different societies.
As a result of the conducted research, a basic mathematical model has been developed, and special cases of its application have been considered. Some patterns related to moral choice are revealed, and their formal description is given. In particular, the situation of manipulation of consciousness is considered in the language of the model, the law of reducing the “morality” of a society consisting of so-called free subjects (that is, those who strive to act in accordance with their intentions and correspond in their actions to the image of their “I”) is formulated.
Keywords: moral choice, mathematical model, intention, readiness function, value system, free subject.
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