Результаты поиска по 'individual-based models':
Найдено статей: 28
  1. Simakov S.S.
    Modern methods of mathematical modeling of blood flow using reduced order methods
    Computer Research and Modeling, 2018, v. 10, no. 5, pp. 581-604

    The study of the physiological and pathophysiological processes in the cardiovascular system is one of the important contemporary issues, which is addressed in many works. In this work, several approaches to the mathematical modelling of the blood flow are considered. They are based on the spatial order reduction and/or use a steady-state approach. Attention is paid to the discussion of the assumptions and suggestions, which are limiting the scope of such models. Some typical mathematical formulations are considered together with the brief review of their numerical implementation. In the first part, we discuss the models, which are based on the full spatial order reduction and/or use a steady-state approach. One of the most popular approaches exploits the analogy between the flow of the viscous fluid in the elastic tubes and the current in the electrical circuit. Such models can be used as an individual tool. They also used for the formulation of the boundary conditions in the models using one dimensional (1D) and three dimensional (3D) spatial coordinates. The use of the dynamical compartment models allows describing haemodynamics over an extended period (by order of tens of cardiac cycles and more). Then, the steady-state models are considered. They may use either total spatial reduction or two dimensional (2D) spatial coordinates. This approach is used for simulation the blood flow in the region of microcirculation. In the second part, we discuss the models, which are based on the spatial order reduction to the 1D coordinate. The models of this type require relatively small computational power relative to the 3D models. Within the scope of this approach, it is also possible to include all large vessels of the organism. The 1D models allow simulation of the haemodynamic parameters in every vessel, which is included in the model network. The structure and the parameters of such a network can be set according to the literature data. It also exists methods of medical data segmentation. The 1D models may be derived from the 3D Navier – Stokes equations either by asymptotic analysis or by integrating them over a volume. The major assumptions are symmetric flow and constant shape of the velocity profile over a cross-section. These assumptions are somewhat restrictive and arguable. Some of the current works paying attention to the 1D model’s validation, to the comparing different 1D models and the comparing 1D models with clinical data. The obtained results reveal acceptable accuracy. It allows concluding, that the 1D approach can be used in medical applications. 1D models allow describing several dynamical processes, such as pulse wave propagation, Korotkov’s tones. Some physiological conditions may be included in the 1D models: gravity force, muscles contraction force, regulation and autoregulation.

    Views (last year): 62. Citations: 2 (RSCI).
  2. Plokhotnikov K.E.
    On the stability of the gravitational system of many bodies
    Computer Research and Modeling, 2021, v. 13, no. 3, pp. 487-511

    In this paper, a gravitational system is understood as a set of point bodies that interact according to Newton's law of attraction and have a negative value of the total energy. The question of the stability (nonstability) of a gravitational system of general position is discussed by direct computational experiment. A gravitational system of general position is a system in which the masses, initial positions, and velocities of bodies are chosen randomly from given ranges. A new method for the numerical solution of ordinary differential equations at large time intervals has been developed for the computational experiment. The proposed method allowed, on the one hand, to ensure the fulfillment of all conservation laws by a suitable correction of solutions, on the other hand, to use standard methods for the numerical solution of systems of differential equations of low approximation order. Within the framework of this method, the trajectory of a gravitational system in phase space is assembled from parts, the duration of each of which can be macroscopic. The constructed trajectory, generally speaking, is discontinuous, and the points of joining of individual pieces of the trajectory act as branch points. In connection with the latter circumstance, the proposed method, in part, can be attributed to the class of Monte Carlo methods. The general conclusion of a series of computational experiments has shown that gravitational systems of general position with a number of bodies of 3 or more, generally speaking, are unstable. In the framework of the proposed method, special cases of zero-equal angular momentum of a gravitational system with a number of bodies of 3 or more, as well as the problem of motion of two bodies, are specially considered. The case of numerical modeling of the dynamics of the solar system in time is considered separately. From the standpoint of computational experiments based on analytical methods, as well as direct numerical methods of high-order approximation (10 and higher), the stability of the solar system was previously demonstrated at an interval of five billion years or more. Due to the limitations on the available computational resources, the stability of the dynamics of the planets of the solar system within the framework of the proposed method was confirmed for a period of ten million years. With the help of a computational experiment, one of the possible scenarios for the disintegration of the solar systems is also considered.

  3. The paper provides the mathematical and numerical models of the interrelated thermo- and hydrodynamic processes in the operational mode of development the unified oil-producing complex during the hydrogel flooding of the non-uniform oil reservoir exploited with a system of arbitrarily located injecting wells and producing wells equipped with submersible multistage electrical centrifugal pumps. A special feature of our approach is the modeling of the special ground-based equipment operation (control stations of submersible pumps, drossel devices on the head of producing wells), designed to regulate the operation modes of both the whole complex and its individual elements.

    The complete differential model includes equations governing non-stationary two-phase five-component filtration in the reservoir, quasi-stationary heat and mass transfer in the wells and working channels of pumps. Special non-linear boundary conditions and dependencies simulate, respectively, the influence of the drossel diameter on the flow rate and pressure at the wellhead of each producing well and the frequency electric current on the performance characteristics of the submersible pump unit. Oil field development is also regulated by the change in bottom-hole pressure of each injection well, concentration of the gel-forming components pumping into the reservoir, their total volume and duration of injection. The problem is solved numerically using conservative difference schemes constructed on the base of the finite difference method, and developed iterative algorithms oriented on the parallel computing technologies. Numerical model is implemented in a software package which can be considered as the «Intellectual System of Wells» for the virtual control the oil field development.

  4. Zubkova E.V., Zhukova L.A., Frolov P.V., Shanin V.N.
    A.S. Komarov’s publications about cellular automata modelling of the population-ontogenetic development in plants: a review
    Computer Research and Modeling, 2016, v. 8, no. 2, pp. 285-295

    The possibilities of cellular automata simulation applied to herbs and dwarf shrubs are described. Basicprinciples of discrete description of the ontogenesis of plants on which the mathematical modeling based are presents. The review discusses the main research results obtained with the use of models that revealing the patterns of functioning of populations and communities. The CAMPUS model and the results of computer experiment to study the growth of two clones of lingonberry with different geometry of the shoots are described. The paper is dedicated to the works of the founder of the direction of prof. A. S. Komarov. A list of his major publications on this subject is given.

    Views (last year): 2. Citations: 6 (RSCI).
  5. Chernavskaya O.D.
    Dynamical theory of information as a basis for natural-constructive approach to modeling a cognitive process
    Computer Research and Modeling, 2017, v. 9, no. 3, pp. 433-447

    The main statements and inferences of the Dynamic Theory Information (DTI) are considered. It is shown that DTI provides the possibility two reveal two essentially important types of information: objective (unconventional) and subjective (conventional) informtion. There are two ways of obtaining information: reception (perception of an already existing one) and generation (production of new) information. It is shown that the processes of generation and perception of information should proceed in two different subsystems of the same cognitive system. The main points of the Natural-Constructivist Approach to modeling the cognitive process are discussed. It is shown that any neuromorphic approach faces the problem of Explanatory Gap between the “Brain” and the “Mind”, i. e. the gap between objectively measurable information about the ensemble of neurons (“Brain”) and subjective information about the human consciousness (“Mind”). The Natural-Constructive Cognitive Architecture developed within the framework of this approach is discussed. It is a complex block-hierarchical combination of several neuroprocessors. The main constructive feature of this architecture is splitting the whole system into two linked subsystems, by analogy with the hemispheres of the human brain. One of the subsystems is processing the new information, learning, and creativity, i.e. for the generation of information. Another subsystem is responsible for processing already existing information, i.e. reception of information. It is shown that the lowest (zero) level of the hierarchy is represented by processors that should record images of real objects (distributed memory) as a response to sensory signals, which is objective information (and refers to the “Brain”). The next hierarchy levels are represented by processors containing symbols of the recorded images. It is shown that symbols represent subjective (conventional) information created by the system itself and providing its individuality. The highest hierarchy levels containing the symbols of abstract concepts provide the possibility to interpret the concepts of “consciousness”, “sub-consciousness”, “intuition”, referring to the field of “Mind”, in terms of the ensemble of neurons. Thus, DTI provides an opportunity to build a model that allows us to trace how the “Mind” could emerge basing on the “Brain”.

    Views (last year): 6.
  6. Malygina N.V., Surkov P.G.
    On the modeling of water obstacles overcoming by Rangifer tarandus L
    Computer Research and Modeling, 2019, v. 11, no. 5, pp. 895-910

    Seasonal migrations and herd instinct are traditionally recognized as wild reindeer (Rangifer tarandus L.) species-specific behavioral signs. These animals are forced to overcome water obstacles during the migrations. Behaviour peculiarities are considered as the result of the selection process, which has chosen among the sets of strategies, as the only evolutionarily stable one, determining the reproduction and biological survival of wild reindeer as a species. Natural processes in the Taimyr population wild reindeer are currently occurring against the background of an increase in the influence of negative factors due to the escalation of the industrial development of the Arctic. That is why the need to identify the ethological features of these animals completely arose. This paper presents the results of applying the classical methods of the theory of optimal control and differential games to the wild reindeer study of the migration patterns in overcoming water barriers, including major rivers. Based on these animals’ ethological features and behavior forms, the herd is presented as a controlled dynamic system, which presents also two classes of individuals: the leader and the rest of the herd, for which their models, describing the trajectories of their movement, are constructed. The models are based on hypotheses, which are the mathematical formalization of some animal behavior patterns. This approach made it possible to find the trajectory of the important one using the methods of the optimal control theory, and in constructing the trajectories of other individuals, apply the principle of control with a guide. Approbation of the obtained results, which can be used in the formation of a common “platform” for the adaptive behavior models systematic construction and as a reserve for the cognitive evolution models fundamental development, is numerically carried out using a model example with observational data on the Werchnyaya Taimyra River.

  7. Stepin Y.P., Leonov D.G., Papilina T.M., Stepankina O.A.
    System modeling, risks evaluation and optimization of a distributed computer system
    Computer Research and Modeling, 2020, v. 12, no. 6, pp. 1349-1359

    The article deals with the problem of a distributed system operation reliability. The system core is an open integration platform that provides interaction of varied software for modeling gas transportation. Some of them provide an access through thin clients on the cloud technology “software as a service”. Mathematical models of operation, transmission and computing are to ensure the operation of an automated dispatching system for oil and gas transportation. The paper presents a system solution based on the theory of Markov random processes and considers the stable operation stage. The stationary operation mode of the Markov chain with continuous time and discrete states is described by a system of Chapman–Kolmogorov equations with respect to the average numbers (mathematical expectations) of the objects in certain states. The objects of research are both system elements that are present in a large number – thin clients and computing modules, and individual ones – a server, a network manager (message broker). Together, they are interacting Markov random processes. The interaction is determined by the fact that the transition probabilities in one group of elements depend on the average numbers of other elements groups.

    The authors propose a multi-criteria dispersion model of risk assessment for such systems (both in the broad and narrow sense, in accordance with the IEC standard). The risk is the standard deviation of estimated object parameter from its average value. The dispersion risk model makes possible to define optimality criteria and whole system functioning risks. In particular, for a thin client, the following is calculated: the loss profit risk, the total risk of losses due to non-productive element states, and the total risk of all system states losses.

    Finally the paper proposes compromise schemes for solving the multi-criteria problem of choosing the optimal operation strategy based on the selected set of compromise criteria.

  8. The second part presents numerical studies of the parameters of the lower ionosphere at altitudes of 40–90 km when heated by powerful high-frequency radio waves of various frequencies and powers. The problem statement is considered in the first part of the article. The main attention is paid to the interrelation between the energy and kinetic parameters of the disturbed $D$-region of the ionosphere in the processes that determine the absorption and transformation of the radio beam energy flux in space and time. The possibility of a significant difference in the behavior of the parameters of the disturbed region in the daytime and at nighttime, both in magnitude and in space-time distribution, is shown. In the absence of sufficiently reliable values of the rate constants for a number of important kinetic processes, numerical studies were carried out in stages with the gradual addition of individual processes and kinetic blocks corresponding at the same time to a certain physical content. It is shown that the energy thresholds for inelastic collisions of electrons with air molecules are the main ones. This approach made it possible to detect the effect of the emergence of a self-oscillating mode of changing parameters if the main channel for energy losses in inelastic processes is the most energy-intensive process — ionization. This effect may play a role in plasma studies using high-frequency inductive and capacitive discharges. The results of calculations of the ionization and optical parameters of the disturbed $D$-region for daytime conditions are presented. The electron temperature, density, emission coefficients in the visible and infrared ranges of the spectrum are obtained for various values of the power of the radio beam and its frequency in the lower ionosphere. The height-time distribution of the absorbed radiation power is calculated, which is necessary in studies of higher layers of the ionosphere. The influence on the electron temperature and on the general behavior of the parameters of energy losses by electrons on the excitation of vibrational and metastable states of molecules has been studied in detail. It is shown that under nighttime conditions, when the electron concentration begins at altitudes of about 80 km, and the concentration of heavy particles decreases by two orders of magnitude compared to the average $D$-region, large-scale gas-dynamic motion can develop with sufficient radio emission power The algorithm was developed based on the McCormack method and two-dimensional gas-dynamic calculations of the behavior of the parameters of the perturbed region were performed with some simplifications of the kinetics.

  9. Pavlov E.A., Osipov G.V.
    Synchronization and chaos in networks of coupled maps in application to modeling of cardiac dynamics
    Computer Research and Modeling, 2011, v. 3, no. 4, pp. 439-453

    The dynamics of coupled elements’ ensembles are investigated in the context of description of spatio-temporal processes in the myocardium. Basic element is map-based model constructed by simplification and reduction of Luo-Rudy model. In particular, capabilities of the model in replication of different regimes of cardiac activity are shown, including excitable and oscillatory regimes. The dynamics of 1D and 2D lattices of coupled oscillatory elements with a random distribution of individual frequencies are considered. Effects of cluster synchronization and transition to global synchronization by increasing of coupling strength are discussed. Impulse propagation in the chain of excitable cells has been observed. Analysis of 2D lattice of excitable elements with target and spiral waves have been made. The characteristics of the spiral wave has been analyzed in depending on the individual parameters of the map and coupling strength between elements of the lattice. A study of mixed ensembles consisting of excitable and oscillatory elements with a gradient changing of the properties have been made, including the task for description of normal and pathological activity of the sinoatrial node.

    Citations: 3 (RSCI).
  10. Kalmykov L.V., Kalmykov V.L.
    Investigation of individual-based mechanisms of single-species population dynamics by logical deterministic cellular automata
    Computer Research and Modeling, 2015, v. 7, no. 6, pp. 1279-1293

    Investigation of logical deterministic cellular automata models of population dynamics allows to reveal detailed individual-based mechanisms. The search for such mechanisms is important in connection with ecological problems caused by overexploitation of natural resources, environmental pollution and climate change. Classical models of population dynamics have the phenomenological nature, as they are “black boxes”. Phenomenological models fundamentally complicate research of detailed mechanisms of ecosystem functioning. We have investigated the role of fecundity and duration of resources regeneration in mechanisms of population growth using four models of ecosystem with one species. These models are logical deterministic cellular automata and are based on physical axiomatics of excitable medium with regeneration. We have modeled catastrophic death of population arising from increasing of resources regeneration duration. It has been shown that greater fecundity accelerates population extinction. The investigated mechanisms are important for understanding mechanisms of sustainability of ecosystems and biodiversity conservation. Prospects of the presented modeling approach as a method of transparent multilevel modeling of complex systems are discussed.

    Views (last year): 16. Citations: 3 (RSCI).
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