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Solving traveling salesman problem via clustering and a new algorithm for merging tours
Computer Research and Modeling, 2025, v. 17, no. 1, pp. 45-58Traditional methods for solving the traveling salesman problem are not effective for high-dimensional problems due to their high computational complexity. One of the most effective ways to solve this problem is the decomposition approach, which includes three main stages: clustering vertices, solving subproblems within each cluster and then merging the obtained solutions into a final solution. This article focuses on the third stage — merging cycles of solving subproblems — since this stage is not always given sufficient attention, which leads to less accurate final solutions of the problem. The paper proposes a new modified Sigal algorithm for merging cycles. To evaluate its effectiveness, it is compared with two algorithms for merging cycles — the method of connecting midpoints of edges and an algorithm based on closeness of cluster centroids. The dependence of quality of solving subproblems on algorithms used for merging cycles is investigated. Sigal’s modified algorithm performs pairwise clustering and minimizes total distance. The centroid method focuses on connecting clusters based on closeness of centroids, and an algorithm using mid-points estimates the distance between mid-points of edges. Two types of clustering — k-means and affinity propagation — were also considered. Numerical experiments were performed using the TSPLIB dataset with different numbers of cities and topologies to test effectiveness of proposed algorithm. The study analyzes errors caused by the order in which clusters were merged, the quality of solving subtasks and number of clusters. Experiments show that the modified Sigal algorithm has the smallest median final distance and the most stable results compared to other methods. Results indicate that the quality of the final solution obtained using the modified Sigal algorithm is more stable depending on the sequence of merging clusters. Improving the quality of solving subproblems usually results in linear improvement of the final solution, but the pooling algorithm rarely affects the degree of this improvement.
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Investigation of the accuracy of the lattice Boltzmann method in calculating acoustic wave propagation
Computer Research and Modeling, 2025, v. 17, no. 6, pp. 1069-1081The article presents a systematic investigation of the capabilities of the lattice Boltzmann method (LBM) for modeling the propagation of acoustic waves. The study considers the problem of wave propagation from a point harmonic source in an unbounded domain, both in a quiescent medium (Mach number $M=0$) and in the presence of a uniform mean flow ($M=0.2$). Both scenarios admit analytical solutions within the framework of linear acoustics, allowing for a quantitative assessment of the accuracy of the numerical method.
The numerical implementation employs the two-dimensional D2Q9 velocity model and the Bhatnagar – Gross – Krook (BGK) collision operator. The oscillatory source is modeled using Gou’s scheme, while spurious high-order moment noise generated by the source is suppressed via a regularization procedure applied to the distribution functions. To minimize wave reflections from the boundaries of the computational domain, a hybrid approach is used, combining characteristic boundary conditions based on Riemann invariants with perfectly matched layers (PML) featuring a parabolic damping profile.
A detailed analysis is conducted to assess the influence of computational parameters on the accuracy of the method. The dependence of the error on the PML thickness ($L_{\text{PML}}^{}$) and the maximum damping coefficient ($\sigma_{\max}^{}$), the dimensionless source amplitude ($Q'_0$), and the grid resolution is thoroughly examined. The results demonstrate that the LBM is suitable for simulating acoustic wave propagation and exhibits second-order accuracy. It is shown that achieving high accuracy (relative pressure error below $1\,\%$) requires a spatial resolution of at least $20$ grid points per wavelength ($\lambda$). The minimal effective PML parameters ensuring negligible boundary reflections are identified as $\sigma_{\max}^{}\geqslant 0.02$ and $L_{\text{PML}}^{} \geqslant 2\lambda$. Additionally, it is shown that for source amplitudes $Q_0' \geqslant 0.1$, nonlinear effects become significant compared to other sources of error.
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The stable estimation of intensity of atmospheric pollution source on the base of sequential function specification method
Computer Research and Modeling, 2009, v. 1, no. 4, pp. 391-403The approach given in this work helps to organize the operative control over action intensity of pollution emissions in atmosphere. The approach allows to sequential estimate of unknown intensity of atmospheric pollution source on the base of concentration measurements of impurity in several stationary control points is offered in the work. The inverse problem was solved by means of the step-by-step regularization and the sequential function specification method. The solution is presented in the form of the digital filter in terms of Hamming. The fitting algorithm of regularization parameter r for function specification method is described.
Keywords: atmospheric pollution, digital filter.Views (last year): 2. -
Approximation of the solution of the non-stationary equation of heat conductivity by the method of probabilistic continuous asynchronous cellular automats for a one-dimensional case
Computer Research and Modeling, 2012, v. 4, no. 2, pp. 293-301Views (last year): 10. Citations: 4 (RSCI).The solution of problems of heat conductivity by means of a method of continuous asynchronous cellular automats is considered in the article. Coordination of distribution of temperature in a sample at a given time between cellular automat model and the exact analytical solution of the equation of heattransfer is shown that speaks about expedient use of this method of modelling. Dependence between time of one cellular automatic interaction and dimension of a cellular automatic field is received.
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Approximation of the periodical functions of high smoothness by the right-angled linear means of Fourier series
Computer Research and Modeling, 2012, v. 4, no. 3, pp. 521-529Citations: 2 (RSCI).We obtain asymptotic equalities for upper bounds of the deviations of the right-angled de la Vallee Poussin sums taken over classes of periodical functions of many variables of high smoothness. These equalities guarantee the solvability of the Kolmogorov–Nikol’skii problem for the right-angled de la Vallee Poussin sums on the specified classes of functions.
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Multi-particle Brownian Dynamics software ProKSim for protein-protein interactions modeling
Computer Research and Modeling, 2013, v. 5, no. 1, pp. 47-64Views (last year): 4. Citations: 8 (RSCI).Protein-protein interactions are of central importance for virtually every process in living matter. Modeling the dynamics of protein association is crucial for understanding their functionality. This paper proposes novel simulation software ProKSim (Protein Kinetics Simulator) for modeling of protein interactions by means of the multi-particle Brownian Dynamics. Effect of long-range electrostatic interactions on the process of transient encounter complex formation is numerically estimated. Investigation of transient encounter complex formation was performed for three pairs of proteins: ferredoxin and ferredoxin:NADP+-redustase, plastocyanin and cytochrome f, barnase and barstar.
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Analysis of stochastically forced equilibria and noise-induced transitions in nonlinear discrete systems
Computer Research and Modeling, 2013, v. 5, no. 4, pp. 559-571Views (last year): 1. Citations: 2 (RSCI).Stochastically forced discrete dynamical systems are considered. Using first approximation systems, we study dynamics of deviations of stochastic solutions from deterministic equilibria. Necessary and sufficient conditions of the existence of stable stationary solutions of equations for mean-square deviations are derived. Stationary values of these mean-square deviations are used for the estimations of the dispersion of random states nearby stable equilibria and analysis of noise-induced transitions. Constructive application of the suggested technique to the analysis of various stochastic regimes in Ricker population model with Allee effect is demonstrated.
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A New Method For Point Estimating Parameters Of Simple Regression
Computer Research and Modeling, 2014, v. 6, no. 1, pp. 57-77Views (last year): 2. Citations: 4 (RSCI).A new method is described for finding parameters of univariate regression model: the greatest cosine method. Implementation of the method involves division of regression model parameters into two groups. The first group of parameters responsible for the angle between the experimental data vector and the regression model vector are defined by the maximum of the cosine of the angle between these vectors. The second group includes the scale factor. It is determined by means of “straightening” the relationship between the experimental data vector and the regression model vector. The interrelation of the greatest cosine method with the method of least squares is examined. Efficiency of the method is illustrated by examples.
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Improvement of image quality in a computer tomography by means of integral transformation of a special kind
Computer Research and Modeling, 2015, v. 7, no. 5, pp. 1033-1046Views (last year): 6.The question on improvement of quality of images obtained in a tomography problem is considered. The problem consists in finding of boundaries of inhomogeneities (inclusions) in a continuous medium by results of X-ray radiography of this medium. A nonlinear integral transformation of a special kind is proposed which allows to improve quality of images obtained earlier at a set of papers. The method is realized numerically by the use of computer modelling. Some calculations are carried out with use of data for concrete materials. The results obtained are presented by drawings and graphic images.
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Marks of stochastic determinacy of forest ecosystem autogenous succession in Markov models
Computer Research and Modeling, 2016, v. 8, no. 2, pp. 255-265Views (last year): 2. Citations: 2 (RSCI).This article describes a method to model the course of forest ecosystem succession to the climax state by means of a Markov chain. In contrast to traditional methods of forest succession modelling based on changes of vegetation types, several variants of the vertical structure of communities formed by late-successional tree species are taken as the transition states of the model. Durations of succession courses from any stage are not set in absolute time units, but calculated as the average number of steps before reaching the climax in a unified time scale. The regularities of succession courses are revealed in the proper time of forest ecosystems shaping. The evidences are obtained that internal features of the spatial and population structure do stochastically determine the course and the pace of forest succession. The property of developing vegetation of forest communities is defined as an attribute of stochastic determinism in the course of autogenous succession.
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